Protein–RNA interactions for Protein: P0CX47

RPS11A, 40S ribosomal protein S11-A, yeastyeast

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS11AP0CX47 SDS24YBR214W 1584 nt6.2□□□□□ -1.42
RPS11AP0CX47 tE(CUC)DtE(CUC)D 72 nt6.2□□□□□ -1.42
RPS11AP0CX47 tE(CUC)ItE(CUC)I 72 nt6.2□□□□□ -1.42
RPS11AP0CX47 CDD1YLR245C 429 nt6.2□□□□□ -1.42
RPS11AP0CX47 ENO1YGR254W 1314 nt6.2□□□□□ -1.42
RPS11AP0CX47 LYS20YDL182W 1287 nt6.19□□□□□ -1.42
RPS11AP0CX47 ADH3YMR083W 1128 nt6.19□□□□□ -1.42
RPS11AP0CX47 PTC6YCR079W 1329 nt6.19□□□□□ -1.42
RPS11AP0CX47 MOB1YIL106W 945 nt6.18□□□□□ -1.42
RPS11AP0CX47 FLX1YIL134W 936 nt6.18□□□□□ -1.42
RPS11AP0CX47 RSM7YJR113C 744 nt6.18□□□□□ -1.42
RPS11AP0CX47 YMR316C-BYMR316C-B 309 nt6.18□□□□□ -1.42
RPS11AP0CX47 IPL1YPL209C 1104 nt6.18□□□□□ -1.42
RPS11AP0CX47 YMC2YBR104W 990 nt6.18□□□□□ -1.42
RPS11AP0CX47 tA(AGC)DtA(AGC)D 73 nt6.17□□□□□ -1.42
RPS11AP0CX47 tA(AGC)FtA(AGC)F 73 nt6.17□□□□□ -1.42
RPS11AP0CX47 tA(AGC)GtA(AGC)G 73 nt6.17□□□□□ -1.42
RPS11AP0CX47 tA(AGC)HtA(AGC)H 73 nt6.17□□□□□ -1.42
RPS11AP0CX47 tA(AGC)JtA(AGC)J 73 nt6.17□□□□□ -1.42
RPS11AP0CX47 tA(AGC)K1tA(AGC)K1 73 nt6.17□□□□□ -1.42
RPS11AP0CX47 tA(AGC)K2tA(AGC)K2 73 nt6.17□□□□□ -1.42
RPS11AP0CX47 tA(AGC)LtA(AGC)L 73 nt6.17□□□□□ -1.42
RPS11AP0CX47 tA(AGC)M1tA(AGC)M1 73 nt6.17□□□□□ -1.42
RPS11AP0CX47 tA(AGC)M2tA(AGC)M2 73 nt6.17□□□□□ -1.42
RPS11AP0CX47 tA(AGC)PtA(AGC)P 73 nt6.17□□□□□ -1.42
RPS11AP0CX47 PHB2YGR231C 933 nt6.17□□□□□ -1.42
RPS11AP0CX47 YJL064WYJL064W 396 nt6.17□□□□□ -1.42
RPS11AP0CX47 ILV2YMR108W 2064 nt6.17□□□□□ -1.42
RPS11AP0CX47 VBA3YCL069W 1377 nt6.17□□□□□ -1.42
RPS11AP0CX47 ESBP6YNL125C 2022 nt6.16□□□□□ -1.42
RPS11AP0CX47 GTB1YDR221W 2109 nt6.16□□□□□ -1.42
RPS11AP0CX47 THI3YDL080C 1830 nt6.16□□□□□ -1.42
RPS11AP0CX47 CYC3YAL039C 810 nt6.16□□□□□ -1.42
RPS11AP0CX47 NPP2YEL016C 1482 nt6.15□□□□□ -1.42
RPS11AP0CX47 YCR025CYCR025C 411 nt6.15□□□□□ -1.42
RPS11AP0CX47 PAU19YMR325W 375 nt6.15□□□□□ -1.42
RPS11AP0CX47 MRS4YKR052C 915 nt6.14□□□□□ -1.43
RPS11AP0CX47 NBA1YOL070C 1506 nt6.14□□□□□ -1.43
RPS11AP0CX47 SRP102YKL154W 735 nt6.13□□□□□ -1.43
RPS11AP0CX47 AAC3YBR085W 924 nt6.12□□□□□ -1.43
RPS11AP0CX47 HXK1YFR053C 1458 nt6.11□□□□□ -1.43
RPS11AP0CX47 TMS1YDR105C 1422 nt6.11□□□□□ -1.43
RPS11AP0CX47 YFR020WYFR020W 699 nt6.11□□□□□ -1.43
RPS11AP0CX47 YIR035CYIR035C 765 nt6.11□□□□□ -1.43
RPS11AP0CX47 AAT1YKL106W 1356 nt6.1□□□□□ -1.43
RPS11AP0CX47 YLR280CYLR280C 351 nt6.1□□□□□ -1.43
RPS11AP0CX47 YLR460CYLR460C 1131 nt6.1□□□□□ -1.43
RPS11AP0CX47 FRE6YLL051C 2139 nt6.1□□□□□ -1.43
RPS11AP0CX47 TPN1YGL186C 1740 nt6.08□□□□□ -1.44
RPS11AP0CX47 GAL2YLR081W 1725 nt6.08□□□□□ -1.44
RPS11AP0CX47 YJL009WYJL009W 327 nt6.08□□□□□ -1.44
RPS11AP0CX47 MTO1YGL236C 2010 nt6.08□□□□□ -1.44
RPS11AP0CX47 ALD5YER073W 1563 nt6.07□□□□□ -1.44
RPS11AP0CX47 SER2YGR208W 930 nt6.07□□□□□ -1.44
RPS11AP0CX47 ERO1YML130C 1692 nt6.07□□□□□ -1.44
RPS11AP0CX47 HTS1YPR033C 1641 nt6.07□□□□□ -1.44
RPS11AP0CX47 DTR1YBR180W 1719 nt6.06□□□□□ -1.44
RPS11AP0CX47 CHS7YHR142W 951 nt6.06□□□□□ -1.44
RPS11AP0CX47 BUB2YMR055C 921 nt6.06□□□□□ -1.44
RPS11AP0CX47 PUP1YOR157C 786 nt6.06□□□□□ -1.44
RPS11AP0CX47 FET5YFL041W 1869 nt6.05□□□□□ -1.44
RPS11AP0CX47 EMC3YKL207W 762 nt6.05□□□□□ -1.44
RPS11AP0CX47 OLA1YBR025C 1185 nt6.05□□□□□ -1.44
RPS11AP0CX47 YJR149WYJR149W 1215 nt6.04□□□□□ -1.44
RPS11AP0CX47 THI6YPL214C 1623 nt6.03□□□□□ -1.44
RPS11AP0CX47 YCP4YCR004C 744 nt6.03□□□□□ -1.44
RPS11AP0CX47 snR86snR86 1004 nt6.03□□□□□ -1.44
RPS11AP0CX47 TRP2YER090W 1524 nt6.03□□□□□ -1.44
RPS11AP0CX47 BSP1YPR171W 1731 nt6.02□□□□□ -1.45
RPS11AP0CX47 YGR210CYGR210C 1236 nt6.02□□□□□ -1.45
RPS11AP0CX47 YMR166CYMR166C 1107 nt6.01□□□□□ -1.45
RPS11AP0CX47 RFC1YOR217W 2586 nt6□□□□□ -1.45
RPS11AP0CX47 SLG1YOR008C 1137 nt6□□□□□ -1.45
RPS11AP0CX47 YOR072WYOR072W 315 nt6□□□□□ -1.45
RPS11AP0CX47 YBR056WYBR056W 1506 nt5.99□□□□□ -1.45
RPS11AP0CX47 HXT11YOL156W 1704 nt5.99□□□□□ -1.45
RPS11AP0CX47 TOK1YJL093C 2076 nt5.99□□□□□ -1.45
RPS11AP0CX47 tD(GUC)BtD(GUC)B 72 nt5.99□□□□□ -1.45
RPS11AP0CX47 tD(GUC)DtD(GUC)D 72 nt5.99□□□□□ -1.45
RPS11AP0CX47 tD(GUC)G1tD(GUC)G1 72 nt5.99□□□□□ -1.45
RPS11AP0CX47 tD(GUC)G2tD(GUC)G2 72 nt5.99□□□□□ -1.45
RPS11AP0CX47 tD(GUC)I1tD(GUC)I1 72 nt5.99□□□□□ -1.45
RPS11AP0CX47 tD(GUC)I2tD(GUC)I2 72 nt5.99□□□□□ -1.45
RPS11AP0CX47 tD(GUC)J1tD(GUC)J1 72 nt5.99□□□□□ -1.45
RPS11AP0CX47 tD(GUC)J2tD(GUC)J2 72 nt5.99□□□□□ -1.45
RPS11AP0CX47 tD(GUC)J3tD(GUC)J3 72 nt5.99□□□□□ -1.45
RPS11AP0CX47 tD(GUC)J4tD(GUC)J4 72 nt5.99□□□□□ -1.45
RPS11AP0CX47 tD(GUC)KtD(GUC)K 72 nt5.99□□□□□ -1.45
RPS11AP0CX47 tD(GUC)L1tD(GUC)L1 72 nt5.99□□□□□ -1.45
RPS11AP0CX47 tD(GUC)L2tD(GUC)L2 72 nt5.99□□□□□ -1.45
RPS11AP0CX47 tD(GUC)MtD(GUC)M 72 nt5.99□□□□□ -1.45
RPS11AP0CX47 tD(GUC)OtD(GUC)O 72 nt5.99□□□□□ -1.45
RPS11AP0CX47 MET22YOL064C 1074 nt5.99□□□□□ -1.45
RPS11AP0CX47 YLR072WYLR072W 2082 nt5.98□□□□□ -1.45
RPS11AP0CX47 SAM50YNL026W 1455 nt5.98□□□□□ -1.45
RPS11AP0CX47 YMR210WYMR210W 1350 nt5.98□□□□□ -1.45
RPS11AP0CX47 MIM1YOL026C 342 nt5.98□□□□□ -1.45
RPS11AP0CX47 YPL108WYPL108W 507 nt5.98□□□□□ -1.45
RPS11AP0CX47 TGA1tA(UGC)A 73 nt5.97□□□□□ -1.45
RPS11AP0CX47 tA(UGC)EtA(UGC)E 73 nt5.97□□□□□ -1.45
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms