Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Becn1O88597 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Becn1O88597 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Becn1O88597 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Becn1O88597 Il17rd-202ENSMUST00000223942 2186 ntBASIC27■■□□□ 1.91
Becn1O88597 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC27■■□□□ 1.91
Becn1O88597 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Becn1O88597 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
Becn1O88597 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC26.99■■□□□ 1.91
Becn1O88597 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Becn1O88597 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Becn1O88597 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Becn1O88597 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
Becn1O88597 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC26.97■■□□□ 1.91
Becn1O88597 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Becn1O88597 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Becn1O88597 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Becn1O88597 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Becn1O88597 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Becn1O88597 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
Becn1O88597 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.94■■□□□ 1.9
Becn1O88597 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Becn1O88597 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Becn1O88597 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Becn1O88597 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC26.93■■□□□ 1.9
Becn1O88597 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Becn1O88597 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC26.92■■□□□ 1.9
Becn1O88597 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
Becn1O88597 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Becn1O88597 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.91■■□□□ 1.9
Becn1O88597 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Becn1O88597 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Becn1O88597 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Becn1O88597 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.9■■□□□ 1.9
Becn1O88597 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Becn1O88597 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
Becn1O88597 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
Becn1O88597 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
Becn1O88597 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.88■■□□□ 1.89
Becn1O88597 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC26.87■■□□□ 1.89
Becn1O88597 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Becn1O88597 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
Becn1O88597 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Becn1O88597 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC26.87■■□□□ 1.89
Becn1O88597 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Becn1O88597 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Becn1O88597 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Becn1O88597 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Becn1O88597 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
Becn1O88597 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Becn1O88597 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Becn1O88597 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.83■■□□□ 1.89
Becn1O88597 Gm16148-201ENSMUST00000119653 893 ntBASIC26.83■■□□□ 1.89
Becn1O88597 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
Becn1O88597 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.82■■□□□ 1.88
Becn1O88597 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Becn1O88597 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Becn1O88597 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Becn1O88597 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Becn1O88597 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Becn1O88597 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
Becn1O88597 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
Becn1O88597 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Becn1O88597 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.78■■□□□ 1.88
Becn1O88597 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Becn1O88597 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Becn1O88597 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Becn1O88597 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Becn1O88597 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Becn1O88597 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Becn1O88597 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Becn1O88597 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Becn1O88597 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Becn1O88597 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Becn1O88597 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
Becn1O88597 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Becn1O88597 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.72■■□□□ 1.87
Becn1O88597 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
Becn1O88597 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Becn1O88597 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
Becn1O88597 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
Becn1O88597 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Becn1O88597 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Becn1O88597 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Becn1O88597 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.69■■□□□ 1.86
Becn1O88597 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC26.69■■□□□ 1.86
Becn1O88597 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.69■■□□□ 1.86
Becn1O88597 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Becn1O88597 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Becn1O88597 AC122428.3-201ENSMUST00000215551 2290 ntBASIC26.68■■□□□ 1.86
Becn1O88597 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Becn1O88597 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
Becn1O88597 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Becn1O88597 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC26.67■■□□□ 1.86
Becn1O88597 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Becn1O88597 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Becn1O88597 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC26.67■■□□□ 1.86
Becn1O88597 Gm20634-201ENSMUST00000090779 2956 ntBASIC26.67■■□□□ 1.86
Becn1O88597 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Becn1O88597 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms