Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Efnb3O35393 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Efnb3O35393 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Efnb3O35393 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Efnb3O35393 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Efnb3O35393 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Efnb3O35393 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Efnb3O35393 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Efnb3O35393 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Efnb3O35393 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Efnb3O35393 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Efnb3O35393 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Efnb3O35393 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Efnb3O35393 Gm16148-201ENSMUST00000119653 893 ntBASIC18.73■□□□□ 0.59
Efnb3O35393 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.73■□□□□ 0.59
Efnb3O35393 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Efnb3O35393 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Efnb3O35393 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.72■□□□□ 0.59
Efnb3O35393 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Efnb3O35393 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Efnb3O35393 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Efnb3O35393 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Efnb3O35393 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Efnb3O35393 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Efnb3O35393 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.71■□□□□ 0.59
Efnb3O35393 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Efnb3O35393 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Efnb3O35393 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Efnb3O35393 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Efnb3O35393 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Efnb3O35393 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Efnb3O35393 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Efnb3O35393 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Efnb3O35393 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Efnb3O35393 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Efnb3O35393 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Efnb3O35393 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Efnb3O35393 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Efnb3O35393 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Efnb3O35393 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Efnb3O35393 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Efnb3O35393 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Efnb3O35393 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.65■□□□□ 0.58
Efnb3O35393 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Efnb3O35393 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Efnb3O35393 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Efnb3O35393 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Efnb3O35393 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.64■□□□□ 0.57
Efnb3O35393 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Efnb3O35393 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Efnb3O35393 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Efnb3O35393 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Efnb3O35393 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Efnb3O35393 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Efnb3O35393 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Efnb3O35393 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Efnb3O35393 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Efnb3O35393 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Efnb3O35393 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Efnb3O35393 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Efnb3O35393 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Efnb3O35393 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Efnb3O35393 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Efnb3O35393 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Efnb3O35393 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Efnb3O35393 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Efnb3O35393 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Efnb3O35393 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Efnb3O35393 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Efnb3O35393 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Efnb3O35393 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Efnb3O35393 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.56■□□□□ 0.56
Efnb3O35393 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Efnb3O35393 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Efnb3O35393 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Efnb3O35393 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Efnb3O35393 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Efnb3O35393 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Efnb3O35393 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Efnb3O35393 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Efnb3O35393 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Efnb3O35393 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Efnb3O35393 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Efnb3O35393 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Efnb3O35393 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Efnb3O35393 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Efnb3O35393 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Efnb3O35393 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Efnb3O35393 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Efnb3O35393 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Efnb3O35393 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Efnb3O35393 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Efnb3O35393 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Efnb3O35393 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Efnb3O35393 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Efnb3O35393 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Efnb3O35393 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Efnb3O35393 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.51■□□□□ 0.55
Efnb3O35393 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Efnb3O35393 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms