Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.92■■□□□ 1.1
Capn1O35350 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.92■■□□□ 1.1
Capn1O35350 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Capn1O35350 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Capn1O35350 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Capn1O35350 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Capn1O35350 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Capn1O35350 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.89■■□□□ 1.09
Capn1O35350 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Capn1O35350 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.89■■□□□ 1.09
Capn1O35350 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Capn1O35350 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Capn1O35350 Amer2-203ENSMUST00000225247 2662 ntBASIC21.88■■□□□ 1.09
Capn1O35350 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Capn1O35350 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Capn1O35350 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Capn1O35350 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Capn1O35350 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Capn1O35350 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Capn1O35350 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
Capn1O35350 Gm11599-201ENSMUST00000118720 878 ntBASIC21.84■■□□□ 1.09
Capn1O35350 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.84■■□□□ 1.09
Capn1O35350 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Capn1O35350 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.83■■□□□ 1.09
Capn1O35350 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.83■■□□□ 1.09
Capn1O35350 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Capn1O35350 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Capn1O35350 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.82■■□□□ 1.08
Capn1O35350 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Capn1O35350 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Capn1O35350 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Capn1O35350 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Capn1O35350 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Capn1O35350 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Capn1O35350 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Capn1O35350 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Capn1O35350 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Capn1O35350 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Capn1O35350 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Capn1O35350 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Capn1O35350 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Capn1O35350 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Capn1O35350 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.78■■□□□ 1.08
Capn1O35350 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Capn1O35350 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.77■■□□□ 1.08
Capn1O35350 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.77■■□□□ 1.08
Capn1O35350 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Capn1O35350 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Capn1O35350 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Capn1O35350 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Capn1O35350 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Capn1O35350 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Capn1O35350 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Capn1O35350 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Capn1O35350 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Capn1O35350 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Capn1O35350 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Capn1O35350 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Capn1O35350 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Capn1O35350 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Capn1O35350 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Capn1O35350 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
Capn1O35350 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.71■■□□□ 1.07
Capn1O35350 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Capn1O35350 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.7■■□□□ 1.06
Capn1O35350 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Capn1O35350 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Capn1O35350 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Capn1O35350 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.69■■□□□ 1.06
Capn1O35350 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Capn1O35350 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Capn1O35350 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Capn1O35350 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Capn1O35350 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Capn1O35350 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.67■■□□□ 1.06
Capn1O35350 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.67■■□□□ 1.06
Capn1O35350 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Capn1O35350 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Capn1O35350 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.67■■□□□ 1.06
Capn1O35350 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Capn1O35350 Gm30023-201ENSMUST00000197970 889 ntBASIC21.65■■□□□ 1.06
Capn1O35350 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Capn1O35350 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Capn1O35350 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Capn1O35350 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Capn1O35350 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Capn1O35350 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Capn1O35350 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Capn1O35350 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Capn1O35350 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.63■■□□□ 1.05
Capn1O35350 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Capn1O35350 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.62■■□□□ 1.05
Capn1O35350 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.61■■□□□ 1.05
Capn1O35350 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Capn1O35350 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.61■■□□□ 1.05
Capn1O35350 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.61■■□□□ 1.05
Capn1O35350 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.6■■□□□ 1.05
Capn1O35350 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Capn1O35350 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.6■■□□□ 1.05
Capn1O35350 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms