Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.26■□□□□ 0.67
Ndufb11O09111 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ndufb11O09111 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ndufb11O09111 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ndufb11O09111 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ndufb11O09111 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ndufb11O09111 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ndufb11O09111 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ndufb11O09111 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ndufb11O09111 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ndufb11O09111 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ndufb11O09111 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ndufb11O09111 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ndufb11O09111 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ndufb11O09111 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ndufb11O09111 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ndufb11O09111 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ndufb11O09111 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ndufb11O09111 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ndufb11O09111 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ndufb11O09111 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Ndufb11O09111 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ndufb11O09111 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Ndufb11O09111 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ndufb11O09111 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.2■□□□□ 0.66
Ndufb11O09111 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Ndufb11O09111 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ndufb11O09111 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ndufb11O09111 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ndufb11O09111 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ndufb11O09111 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ndufb11O09111 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ndufb11O09111 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Ndufb11O09111 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ndufb11O09111 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ndufb11O09111 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ndufb11O09111 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ndufb11O09111 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Ndufb11O09111 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ndufb11O09111 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ndufb11O09111 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ndufb11O09111 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.14■□□□□ 0.65
Ndufb11O09111 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Ndufb11O09111 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ndufb11O09111 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.14■□□□□ 0.65
Ndufb11O09111 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ndufb11O09111 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ndufb11O09111 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ndufb11O09111 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ndufb11O09111 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ndufb11O09111 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ndufb11O09111 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ndufb11O09111 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ndufb11O09111 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ndufb11O09111 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ndufb11O09111 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ndufb11O09111 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ndufb11O09111 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.1■□□□□ 0.65
Ndufb11O09111 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ndufb11O09111 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.09■□□□□ 0.65
Ndufb11O09111 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Ndufb11O09111 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ndufb11O09111 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ndufb11O09111 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.08■□□□□ 0.65
Ndufb11O09111 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ndufb11O09111 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ndufb11O09111 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ndufb11O09111 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ndufb11O09111 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ndufb11O09111 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ndufb11O09111 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.07■□□□□ 0.64
Ndufb11O09111 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ndufb11O09111 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ndufb11O09111 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ndufb11O09111 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ndufb11O09111 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.06■□□□□ 0.64
Ndufb11O09111 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ndufb11O09111 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ndufb11O09111 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.04■□□□□ 0.64
Ndufb11O09111 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.04■□□□□ 0.64
Ndufb11O09111 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ndufb11O09111 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ndufb11O09111 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ndufb11O09111 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ndufb11O09111 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.02■□□□□ 0.64
Ndufb11O09111 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ndufb11O09111 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ndufb11O09111 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ndufb11O09111 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ndufb11O09111 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ndufb11O09111 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ndufb11O09111 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ndufb11O09111 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ndufb11O09111 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ndufb11O09111 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ndufb11O09111 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ndufb11O09111 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ndufb11O09111 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ndufb11O09111 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ndufb11O09111 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms