Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pkd1O08852 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pkd1O08852 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pkd1O08852 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC15.89■□□□□ 0.13
Pkd1O08852 Scarna2-201ENSMUST00000157560 414 ntBASIC15.89■□□□□ 0.13
Pkd1O08852 Gm9806-201ENSMUST00000051080 552 ntBASIC15.89■□□□□ 0.13
Pkd1O08852 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pkd1O08852 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC15.88■□□□□ 0.13
Pkd1O08852 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pkd1O08852 Gm2415-204ENSMUST00000190235 2004 ntBASIC15.88■□□□□ 0.13
Pkd1O08852 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pkd1O08852 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.87■□□□□ 0.13
Pkd1O08852 Gm22567-201ENSMUST00000175542 342 ntBASIC15.87■□□□□ 0.13
Pkd1O08852 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pkd1O08852 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pkd1O08852 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pkd1O08852 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pkd1O08852 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pkd1O08852 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pkd1O08852 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pkd1O08852 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pkd1O08852 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC15.84■□□□□ 0.13
Pkd1O08852 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Pkd1O08852 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pkd1O08852 Gm30023-201ENSMUST00000197970 889 ntBASIC15.83■□□□□ 0.13
Pkd1O08852 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pkd1O08852 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pkd1O08852 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1O08852 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1O08852 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1O08852 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Pkd1O08852 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC15.82■□□□□ 0.12
Pkd1O08852 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1O08852 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1O08852 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1O08852 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pkd1O08852 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Pkd1O08852 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pkd1O08852 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pkd1O08852 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pkd1O08852 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pkd1O08852 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pkd1O08852 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pkd1O08852 Gm11687-201ENSMUST00000118911 886 ntBASIC15.78■□□□□ 0.12
Pkd1O08852 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pkd1O08852 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pkd1O08852 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pkd1O08852 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pkd1O08852 Gm5812-201ENSMUST00000061073 957 ntBASIC15.78■□□□□ 0.12
Pkd1O08852 Gm45364-201ENSMUST00000210883 159 ntBASIC15.77■□□□□ 0.12
Pkd1O08852 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC15.77■□□□□ 0.11
Pkd1O08852 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pkd1O08852 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pkd1O08852 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC15.76■□□□□ 0.11
Pkd1O08852 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pkd1O08852 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC15.75■□□□□ 0.11
Pkd1O08852 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pkd1O08852 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.75■□□□□ 0.11
Pkd1O08852 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pkd1O08852 Particl-201ENSMUST00000205370 1560 ntBASIC15.75■□□□□ 0.11
Pkd1O08852 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pkd1O08852 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC15.74■□□□□ 0.11
Pkd1O08852 Gm16437-201ENSMUST00000025669 507 ntBASIC15.74■□□□□ 0.11
Pkd1O08852 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pkd1O08852 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pkd1O08852 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Pkd1O08852 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pkd1O08852 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pkd1O08852 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pkd1O08852 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC15.71■□□□□ 0.11
Pkd1O08852 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC15.71■□□□□ 0.11
Pkd1O08852 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pkd1O08852 Gm7332-201ENSMUST00000118351 454 ntBASIC15.7■□□□□ 0.1
Pkd1O08852 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pkd1O08852 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pkd1O08852 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.7■□□□□ 0.1
Pkd1O08852 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Pkd1O08852 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pkd1O08852 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pkd1O08852 Gm27502-201ENSMUST00000183495 199 ntBASIC15.68■□□□□ 0.1
Pkd1O08852 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pkd1O08852 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC15.68■□□□□ 0.1
Pkd1O08852 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pkd1O08852 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pkd1O08852 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pkd1O08852 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pkd1O08852 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.66■□□□□ 0.1
Pkd1O08852 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pkd1O08852 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Pkd1O08852 Gm14523-201ENSMUST00000117260 558 ntBASIC15.65■□□□□ 0.1
Pkd1O08852 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pkd1O08852 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pkd1O08852 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pkd1O08852 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC15.64■□□□□ 0.09
Pkd1O08852 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pkd1O08852 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pkd1O08852 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pkd1O08852 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pkd1O08852 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pkd1O08852 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms