Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.7■■□□□ 1.86
Pcdh11xF6ZNL5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
Pcdh11xF6ZNL5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
Pcdh11xF6ZNL5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Pcdh11xF6ZNL5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Pcdh11xF6ZNL5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdh11xF6ZNL5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdh11xF6ZNL5 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.65■■□□□ 1.86
Pcdh11xF6ZNL5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pcdh11xF6ZNL5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pcdh11xF6ZNL5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pcdh11xF6ZNL5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.62■■□□□ 1.85
Pcdh11xF6ZNL5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
Pcdh11xF6ZNL5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
Pcdh11xF6ZNL5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Pcdh11xF6ZNL5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.61■■□□□ 1.85
Pcdh11xF6ZNL5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Pcdh11xF6ZNL5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdh11xF6ZNL5 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.6■■□□□ 1.85
Pcdh11xF6ZNL5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdh11xF6ZNL5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdh11xF6ZNL5 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Pcdh11xF6ZNL5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Pcdh11xF6ZNL5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Pcdh11xF6ZNL5 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Pcdh11xF6ZNL5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdh11xF6ZNL5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdh11xF6ZNL5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
Pcdh11xF6ZNL5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Pcdh11xF6ZNL5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.55■■□□□ 1.84
Pcdh11xF6ZNL5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Pcdh11xF6ZNL5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdh11xF6ZNL5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdh11xF6ZNL5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdh11xF6ZNL5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdh11xF6ZNL5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdh11xF6ZNL5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Pcdh11xF6ZNL5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Pcdh11xF6ZNL5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Pcdh11xF6ZNL5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Pcdh11xF6ZNL5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Pcdh11xF6ZNL5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Pcdh11xF6ZNL5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Pcdh11xF6ZNL5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Pcdh11xF6ZNL5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Pcdh11xF6ZNL5 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC26.48■■□□□ 1.83
Pcdh11xF6ZNL5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdh11xF6ZNL5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdh11xF6ZNL5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdh11xF6ZNL5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdh11xF6ZNL5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pcdh11xF6ZNL5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pcdh11xF6ZNL5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pcdh11xF6ZNL5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Pcdh11xF6ZNL5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.45■■□□□ 1.83
Pcdh11xF6ZNL5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Pcdh11xF6ZNL5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Pcdh11xF6ZNL5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Pcdh11xF6ZNL5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdh11xF6ZNL5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.43■■□□□ 1.82
Pcdh11xF6ZNL5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdh11xF6ZNL5 Gm30023-201ENSMUST00000197970 889 ntBASIC26.41■■□□□ 1.82
Pcdh11xF6ZNL5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC26.41■■□□□ 1.82
Pcdh11xF6ZNL5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
Pcdh11xF6ZNL5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Pcdh11xF6ZNL5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pcdh11xF6ZNL5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pcdh11xF6ZNL5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Pcdh11xF6ZNL5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Pcdh11xF6ZNL5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdh11xF6ZNL5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC26.38■■□□□ 1.81
Pcdh11xF6ZNL5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.38■■□□□ 1.81
Pcdh11xF6ZNL5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdh11xF6ZNL5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Pcdh11xF6ZNL5 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.38■■□□□ 1.81
Pcdh11xF6ZNL5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdh11xF6ZNL5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pcdh11xF6ZNL5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Pcdh11xF6ZNL5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdh11xF6ZNL5 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
Pcdh11xF6ZNL5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.35■■□□□ 1.81
Pcdh11xF6ZNL5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcdh11xF6ZNL5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
Pcdh11xF6ZNL5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.34■■□□□ 1.81
Pcdh11xF6ZNL5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcdh11xF6ZNL5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcdh11xF6ZNL5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pcdh11xF6ZNL5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Pcdh11xF6ZNL5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Pcdh11xF6ZNL5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
Pcdh11xF6ZNL5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.32■■□□□ 1.8
Pcdh11xF6ZNL5 Gm8503-201ENSMUST00000118131 455 ntBASIC26.32■■□□□ 1.8
Pcdh11xF6ZNL5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdh11xF6ZNL5 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdh11xF6ZNL5 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pcdh11xF6ZNL5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdh11xF6ZNL5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdh11xF6ZNL5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdh11xF6ZNL5 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdh11xF6ZNL5 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms