Protein–RNA interactions for Protein: D3YUM8

Gm4950, Proteasome subunit beta type, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4950D3YUM8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm4950D3YUM8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Gm4950D3YUM8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm4950D3YUM8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm4950D3YUM8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm4950D3YUM8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm4950D3YUM8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm4950D3YUM8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm4950D3YUM8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Gm4950D3YUM8 Gm45855-201ENSMUST00000212546 880 ntBASIC20.31■□□□□ 0.84
Gm4950D3YUM8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm4950D3YUM8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
Gm4950D3YUM8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm4950D3YUM8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm4950D3YUM8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.29■□□□□ 0.84
Gm4950D3YUM8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm4950D3YUM8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Gm4950D3YUM8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.28■□□□□ 0.84
Gm4950D3YUM8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.28■□□□□ 0.84
Gm4950D3YUM8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm4950D3YUM8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm4950D3YUM8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm4950D3YUM8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm4950D3YUM8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Gm4950D3YUM8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Gm4950D3YUM8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm4950D3YUM8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm4950D3YUM8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm4950D3YUM8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gm4950D3YUM8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm4950D3YUM8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm4950D3YUM8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Gm4950D3YUM8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.22■□□□□ 0.83
Gm4950D3YUM8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm4950D3YUM8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.22■□□□□ 0.83
Gm4950D3YUM8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm4950D3YUM8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.21■□□□□ 0.83
Gm4950D3YUM8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm4950D3YUM8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Gm4950D3YUM8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm4950D3YUM8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm4950D3YUM8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm4950D3YUM8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm4950D3YUM8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm4950D3YUM8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm4950D3YUM8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm4950D3YUM8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm4950D3YUM8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm4950D3YUM8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm4950D3YUM8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.16■□□□□ 0.82
Gm4950D3YUM8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm4950D3YUM8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Gm4950D3YUM8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Gm4950D3YUM8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.15■□□□□ 0.82
Gm4950D3YUM8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Gm4950D3YUM8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm4950D3YUM8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm4950D3YUM8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm4950D3YUM8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm4950D3YUM8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm4950D3YUM8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Gm4950D3YUM8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Gm4950D3YUM8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Gm4950D3YUM8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm4950D3YUM8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm4950D3YUM8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm4950D3YUM8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm4950D3YUM8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm4950D3YUM8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm4950D3YUM8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm4950D3YUM8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm4950D3YUM8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Gm4950D3YUM8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.09■□□□□ 0.81
Gm4950D3YUM8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.09■□□□□ 0.81
Gm4950D3YUM8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm4950D3YUM8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Gm4950D3YUM8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm4950D3YUM8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm4950D3YUM8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm4950D3YUM8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm4950D3YUM8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Gm4950D3YUM8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm4950D3YUM8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm4950D3YUM8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.07■□□□□ 0.8
Gm4950D3YUM8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm4950D3YUM8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm4950D3YUM8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gm4950D3YUM8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm4950D3YUM8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.05■□□□□ 0.8
Gm4950D3YUM8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm4950D3YUM8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gm4950D3YUM8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.04■□□□□ 0.8
Gm4950D3YUM8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gm4950D3YUM8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm4950D3YUM8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm4950D3YUM8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm4950D3YUM8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm4950D3YUM8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm4950D3YUM8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm4950D3YUM8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms