Protein–RNA interactions for Protein: C0HKE4

Hist1h2ae, Histone H2A type 1-E, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aeC0HKE4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hist1h2aeC0HKE4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.73■■□□□ 1.07
Hist1h2aeC0HKE4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hist1h2aeC0HKE4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.73■■□□□ 1.07
Hist1h2aeC0HKE4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hist1h2aeC0HKE4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hist1h2aeC0HKE4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.72■■□□□ 1.07
Hist1h2aeC0HKE4 Gm24970-201ENSMUST00000175582 82 ntBASIC21.72■■□□□ 1.07
Hist1h2aeC0HKE4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.72■■□□□ 1.07
Hist1h2aeC0HKE4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hist1h2aeC0HKE4 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.72■■□□□ 1.07
Hist1h2aeC0HKE4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hist1h2aeC0HKE4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Hist1h2aeC0HKE4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hist1h2aeC0HKE4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Hist1h2aeC0HKE4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Hist1h2aeC0HKE4 Gm45855-201ENSMUST00000212546 880 ntBASIC21.7■■□□□ 1.06
Hist1h2aeC0HKE4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hist1h2aeC0HKE4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Hist1h2aeC0HKE4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hist1h2aeC0HKE4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hist1h2aeC0HKE4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Hist1h2aeC0HKE4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.65■■□□□ 1.06
Hist1h2aeC0HKE4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hist1h2aeC0HKE4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Hist1h2aeC0HKE4 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hist1h2aeC0HKE4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hist1h2aeC0HKE4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hist1h2aeC0HKE4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.63■■□□□ 1.05
Hist1h2aeC0HKE4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hist1h2aeC0HKE4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.62■■□□□ 1.05
Hist1h2aeC0HKE4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hist1h2aeC0HKE4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hist1h2aeC0HKE4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Hist1h2aeC0HKE4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Hist1h2aeC0HKE4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hist1h2aeC0HKE4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
Hist1h2aeC0HKE4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hist1h2aeC0HKE4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
Hist1h2aeC0HKE4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Hist1h2aeC0HKE4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Hist1h2aeC0HKE4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hist1h2aeC0HKE4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.59■■□□□ 1.05
Hist1h2aeC0HKE4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hist1h2aeC0HKE4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hist1h2aeC0HKE4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hist1h2aeC0HKE4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Hist1h2aeC0HKE4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hist1h2aeC0HKE4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.57■■□□□ 1.04
Hist1h2aeC0HKE4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hist1h2aeC0HKE4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hist1h2aeC0HKE4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Hist1h2aeC0HKE4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Hist1h2aeC0HKE4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hist1h2aeC0HKE4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hist1h2aeC0HKE4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.55■■□□□ 1.04
Hist1h2aeC0HKE4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hist1h2aeC0HKE4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hist1h2aeC0HKE4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Hist1h2aeC0HKE4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Hist1h2aeC0HKE4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hist1h2aeC0HKE4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hist1h2aeC0HKE4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hist1h2aeC0HKE4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hist1h2aeC0HKE4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Hist1h2aeC0HKE4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.03
Hist1h2aeC0HKE4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hist1h2aeC0HKE4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hist1h2aeC0HKE4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hist1h2aeC0HKE4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hist1h2aeC0HKE4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hist1h2aeC0HKE4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hist1h2aeC0HKE4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.48■■□□□ 1.03
Hist1h2aeC0HKE4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Hist1h2aeC0HKE4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hist1h2aeC0HKE4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Hist1h2aeC0HKE4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Hist1h2aeC0HKE4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Hist1h2aeC0HKE4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hist1h2aeC0HKE4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Hist1h2aeC0HKE4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hist1h2aeC0HKE4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hist1h2aeC0HKE4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hist1h2aeC0HKE4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Hist1h2aeC0HKE4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hist1h2aeC0HKE4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hist1h2aeC0HKE4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hist1h2aeC0HKE4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Hist1h2aeC0HKE4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Hist1h2aeC0HKE4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hist1h2aeC0HKE4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
Hist1h2aeC0HKE4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hist1h2aeC0HKE4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hist1h2aeC0HKE4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.42■■□□□ 1.02
Hist1h2aeC0HKE4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.42■■□□□ 1.02
Hist1h2aeC0HKE4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hist1h2aeC0HKE4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Hist1h2aeC0HKE4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hist1h2aeC0HKE4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Hist1h2aeC0HKE4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms