Protein–RNA interactions for Protein: A7TZF3

Skint4, Selection and upkeep of intraepithelial T-cells protein 4, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skint4A7TZF3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Skint4A7TZF3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Skint4A7TZF3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Skint4A7TZF3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Skint4A7TZF3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Skint4A7TZF3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Skint4A7TZF3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Skint4A7TZF3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Skint4A7TZF3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Skint4A7TZF3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Skint4A7TZF3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.2■□□□□ 0.98
Skint4A7TZF3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Skint4A7TZF3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Skint4A7TZF3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Skint4A7TZF3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Skint4A7TZF3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Skint4A7TZF3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Skint4A7TZF3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Skint4A7TZF3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Skint4A7TZF3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Skint4A7TZF3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Skint4A7TZF3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Skint4A7TZF3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Skint4A7TZF3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Skint4A7TZF3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.17■□□□□ 0.98
Skint4A7TZF3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Skint4A7TZF3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Skint4A7TZF3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Skint4A7TZF3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Skint4A7TZF3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Skint4A7TZF3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Skint4A7TZF3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Skint4A7TZF3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Skint4A7TZF3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Skint4A7TZF3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Skint4A7TZF3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Skint4A7TZF3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Skint4A7TZF3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Skint4A7TZF3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Skint4A7TZF3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Skint4A7TZF3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Skint4A7TZF3 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.14■□□□□ 0.97
Skint4A7TZF3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Skint4A7TZF3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Skint4A7TZF3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Skint4A7TZF3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.13■□□□□ 0.97
Skint4A7TZF3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Skint4A7TZF3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Skint4A7TZF3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.11■□□□□ 0.97
Skint4A7TZF3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Skint4A7TZF3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Skint4A7TZF3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Skint4A7TZF3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Skint4A7TZF3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.09■□□□□ 0.97
Skint4A7TZF3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Skint4A7TZF3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Skint4A7TZF3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Skint4A7TZF3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Skint4A7TZF3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Skint4A7TZF3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Skint4A7TZF3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Skint4A7TZF3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Skint4A7TZF3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Skint4A7TZF3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Skint4A7TZF3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Skint4A7TZF3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.05■□□□□ 0.96
Skint4A7TZF3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.05■□□□□ 0.96
Skint4A7TZF3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Skint4A7TZF3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Skint4A7TZF3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Skint4A7TZF3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Skint4A7TZF3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.04■□□□□ 0.96
Skint4A7TZF3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Skint4A7TZF3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Skint4A7TZF3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Skint4A7TZF3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Skint4A7TZF3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Skint4A7TZF3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Skint4A7TZF3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Skint4A7TZF3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Skint4A7TZF3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Skint4A7TZF3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Skint4A7TZF3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Skint4A7TZF3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Skint4A7TZF3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Skint4A7TZF3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Skint4A7TZF3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Skint4A7TZF3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Skint4A7TZF3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Skint4A7TZF3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Skint4A7TZF3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Skint4A7TZF3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Skint4A7TZF3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Skint4A7TZF3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Skint4A7TZF3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Skint4A7TZF3 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.95■□□□□ 0.94
Skint4A7TZF3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.95■□□□□ 0.94
Skint4A7TZF3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Skint4A7TZF3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Skint4A7TZF3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms