Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Sh2d4bA6X942 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Sh2d4bA6X942 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Sh2d4bA6X942 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Sh2d4bA6X942 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Sh2d4bA6X942 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
Sh2d4bA6X942 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
Sh2d4bA6X942 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.43■■□□□ 1.66
Sh2d4bA6X942 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Sh2d4bA6X942 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Sh2d4bA6X942 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Sh2d4bA6X942 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.42■■□□□ 1.66
Sh2d4bA6X942 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
Sh2d4bA6X942 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Sh2d4bA6X942 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Sh2d4bA6X942 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Sh2d4bA6X942 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
Sh2d4bA6X942 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.39■■□□□ 1.66
Sh2d4bA6X942 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.37■■□□□ 1.65
Sh2d4bA6X942 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Sh2d4bA6X942 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Sh2d4bA6X942 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Sh2d4bA6X942 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
Sh2d4bA6X942 Gm6311-201ENSMUST00000073790 878 ntBASIC25.34■■□□□ 1.65
Sh2d4bA6X942 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Sh2d4bA6X942 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Sh2d4bA6X942 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Sh2d4bA6X942 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Sh2d4bA6X942 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.31■■□□□ 1.64
Sh2d4bA6X942 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Sh2d4bA6X942 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
Sh2d4bA6X942 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
Sh2d4bA6X942 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Sh2d4bA6X942 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Sh2d4bA6X942 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.29■■□□□ 1.64
Sh2d4bA6X942 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Sh2d4bA6X942 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25.28■■□□□ 1.64
Sh2d4bA6X942 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Sh2d4bA6X942 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Sh2d4bA6X942 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Sh2d4bA6X942 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Sh2d4bA6X942 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
Sh2d4bA6X942 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.26■■□□□ 1.63
Sh2d4bA6X942 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.26■■□□□ 1.63
Sh2d4bA6X942 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Sh2d4bA6X942 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Sh2d4bA6X942 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Sh2d4bA6X942 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Sh2d4bA6X942 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Sh2d4bA6X942 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.25■■□□□ 1.63
Sh2d4bA6X942 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Sh2d4bA6X942 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Sh2d4bA6X942 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Sh2d4bA6X942 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC25.23■■□□□ 1.63
Sh2d4bA6X942 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Sh2d4bA6X942 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Sh2d4bA6X942 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Sh2d4bA6X942 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Sh2d4bA6X942 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25.21■■□□□ 1.63
Sh2d4bA6X942 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Sh2d4bA6X942 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Sh2d4bA6X942 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Sh2d4bA6X942 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.2■■□□□ 1.62
Sh2d4bA6X942 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC25.2■■□□□ 1.62
Sh2d4bA6X942 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Sh2d4bA6X942 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Sh2d4bA6X942 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC25.19■■□□□ 1.62
Sh2d4bA6X942 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25.19■■□□□ 1.62
Sh2d4bA6X942 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Sh2d4bA6X942 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.19■■□□□ 1.62
Sh2d4bA6X942 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Sh2d4bA6X942 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Sh2d4bA6X942 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Sh2d4bA6X942 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Sh2d4bA6X942 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25.17■■□□□ 1.62
Sh2d4bA6X942 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Sh2d4bA6X942 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
Sh2d4bA6X942 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Sh2d4bA6X942 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25.14■■□□□ 1.62
Sh2d4bA6X942 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.14■■□□□ 1.61
Sh2d4bA6X942 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Sh2d4bA6X942 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
Sh2d4bA6X942 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Sh2d4bA6X942 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Sh2d4bA6X942 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Sh2d4bA6X942 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sh2d4bA6X942 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Sh2d4bA6X942 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Sh2d4bA6X942 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Sh2d4bA6X942 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Sh2d4bA6X942 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.1■■□□□ 1.61
Sh2d4bA6X942 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Sh2d4bA6X942 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Sh2d4bA6X942 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Sh2d4bA6X942 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Sh2d4bA6X942 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.08■■□□□ 1.61
Sh2d4bA6X942 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.08■■□□□ 1.6
Sh2d4bA6X942 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sh2d4bA6X942 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC25.07■■□□□ 1.6
Sh2d4bA6X942 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms