Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC40.06■■■■■ 4
Shroom2A2ALU4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC40.05■■■■■ 4
Shroom2A2ALU4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC40.03■■■■■ 4
Shroom2A2ALU4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC40.01■■■■■ 4
Shroom2A2ALU4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC40■■■■□ 3.99
Shroom2A2ALU4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC40■■■■□ 3.99
Shroom2A2ALU4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC39.99■■■■□ 3.99
Shroom2A2ALU4 Gm27502-201ENSMUST00000183495 199 ntBASIC39.99■■■■□ 3.99
Shroom2A2ALU4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC39.98■■■■□ 3.99
Shroom2A2ALU4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC39.96■■■■□ 3.99
Shroom2A2ALU4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC39.96■■■■□ 3.99
Shroom2A2ALU4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC39.96■■■■□ 3.99
Shroom2A2ALU4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC39.96■■■■□ 3.99
Shroom2A2ALU4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC39.94■■■■□ 3.98
Shroom2A2ALU4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC39.93■■■■□ 3.98
Shroom2A2ALU4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC39.93■■■■□ 3.98
Shroom2A2ALU4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC39.93■■■■□ 3.98
Shroom2A2ALU4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC39.92■■■■□ 3.98
Shroom2A2ALU4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC39.91■■■■□ 3.98
Shroom2A2ALU4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC39.88■■■■□ 3.98
Shroom2A2ALU4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC39.88■■■■□ 3.98
Shroom2A2ALU4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC39.88■■■■□ 3.97
Shroom2A2ALU4 Gm16437-201ENSMUST00000025669 507 ntBASIC39.88■■■■□ 3.97
Shroom2A2ALU4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC39.87■■■■□ 3.97
Shroom2A2ALU4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC39.87■■■■□ 3.97
Shroom2A2ALU4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC39.85■■■■□ 3.97
Shroom2A2ALU4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC39.84■■■■□ 3.97
Shroom2A2ALU4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC39.83■■■■□ 3.97
Shroom2A2ALU4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC39.83■■■■□ 3.97
Shroom2A2ALU4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC39.83■■■■□ 3.97
Shroom2A2ALU4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC39.83■■■■□ 3.97
Shroom2A2ALU4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC39.81■■■■□ 3.96
Shroom2A2ALU4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC39.8■■■■□ 3.96
Shroom2A2ALU4 Particl-201ENSMUST00000205370 1560 ntBASIC39.8■■■■□ 3.96
Shroom2A2ALU4 Gm15546-201ENSMUST00000122095 826 ntBASIC39.79■■■■□ 3.96
Shroom2A2ALU4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC39.78■■■■□ 3.96
Shroom2A2ALU4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC39.78■■■■□ 3.96
Shroom2A2ALU4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
Shroom2A2ALU4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
Shroom2A2ALU4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC39.77■■■■□ 3.96
Shroom2A2ALU4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC39.75■■■■□ 3.95
Shroom2A2ALU4 Gm5921-201ENSMUST00000075898 882 ntBASIC39.75■■■■□ 3.95
Shroom2A2ALU4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC39.74■■■■□ 3.95
Shroom2A2ALU4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC39.72■■■■□ 3.95
Shroom2A2ALU4 Gm14523-201ENSMUST00000117260 558 ntBASIC39.71■■■■□ 3.95
Shroom2A2ALU4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC39.71■■■■□ 3.95
Shroom2A2ALU4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
Shroom2A2ALU4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC39.7■■■■□ 3.95
Shroom2A2ALU4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC39.7■■■■□ 3.95
Shroom2A2ALU4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC39.69■■■■□ 3.94
Shroom2A2ALU4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC39.69■■■■□ 3.94
Shroom2A2ALU4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC39.68■■■■□ 3.94
Shroom2A2ALU4 Pkd1-207ENSMUST00000228550 1050 ntBASIC39.68■■■■□ 3.94
Shroom2A2ALU4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC39.66■■■■□ 3.94
Shroom2A2ALU4 Gm30346-201ENSMUST00000218641 1699 ntBASIC39.65■■■■□ 3.94
Shroom2A2ALU4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC39.64■■■■□ 3.94
Shroom2A2ALU4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC39.63■■■■□ 3.93
Shroom2A2ALU4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC39.62■■■■□ 3.93
Shroom2A2ALU4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC39.62■■■■□ 3.93
Shroom2A2ALU4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC39.62■■■■□ 3.93
Shroom2A2ALU4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC39.61■■■■□ 3.93
Shroom2A2ALU4 Gm5522-201ENSMUST00000189483 1242 ntBASIC39.58■■■■□ 3.93
Shroom2A2ALU4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC39.58■■■■□ 3.93
Shroom2A2ALU4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC39.57■■■■□ 3.92
Shroom2A2ALU4 Gm5067-201ENSMUST00000170449 1009 ntBASIC39.56■■■■□ 3.92
Shroom2A2ALU4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC39.56■■■■□ 3.92
Shroom2A2ALU4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC39.56■■■■□ 3.92
Shroom2A2ALU4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC39.56■■■■□ 3.92
Shroom2A2ALU4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC39.56■■■■□ 3.92
Shroom2A2ALU4 AC154454.1-201ENSMUST00000225253 216 ntBASIC39.56■■■■□ 3.92
Shroom2A2ALU4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC39.53■■■■□ 3.92
Shroom2A2ALU4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC39.53■■■■□ 3.92
Shroom2A2ALU4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC39.52■■■■□ 3.92
Shroom2A2ALU4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC39.52■■■■□ 3.92
Shroom2A2ALU4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC39.52■■■■□ 3.92
Shroom2A2ALU4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC39.52■■■■□ 3.92
Shroom2A2ALU4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC39.51■■■■□ 3.92
Shroom2A2ALU4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC39.5■■■■□ 3.91
Shroom2A2ALU4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
Shroom2A2ALU4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
Shroom2A2ALU4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC39.49■■■■□ 3.91
Shroom2A2ALU4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC39.48■■■■□ 3.91
Shroom2A2ALU4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC39.48■■■■□ 3.91
Shroom2A2ALU4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC39.45■■■■□ 3.91
Shroom2A2ALU4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC39.45■■■■□ 3.91
Shroom2A2ALU4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC39.44■■■■□ 3.9
Shroom2A2ALU4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC39.44■■■■□ 3.9
Shroom2A2ALU4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC39.44■■■■□ 3.9
Shroom2A2ALU4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC39.43■■■■□ 3.9
Shroom2A2ALU4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
Shroom2A2ALU4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC39.43■■■■□ 3.9
Shroom2A2ALU4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC39.43■■■■□ 3.9
Shroom2A2ALU4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC39.4■■■■□ 3.9
Shroom2A2ALU4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC39.39■■■■□ 3.9
Shroom2A2ALU4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC39.39■■■■□ 3.9
Shroom2A2ALU4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC39.38■■■■□ 3.9
Shroom2A2ALU4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC39.37■■■■□ 3.89
Shroom2A2ALU4 Gm45364-201ENSMUST00000210883 159 ntBASIC39.37■■■■□ 3.89
Shroom2A2ALU4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
Shroom2A2ALU4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC39.37■■■■□ 3.89
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms