Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Igkv3-4A0A140T8Q4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Igkv3-4A0A140T8Q4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Igkv3-4A0A140T8Q4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Igkv3-4A0A140T8Q4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igkv3-4A0A140T8Q4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igkv3-4A0A140T8Q4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igkv3-4A0A140T8Q4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igkv3-4A0A140T8Q4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Igkv3-4A0A140T8Q4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igkv3-4A0A140T8Q4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Igkv3-4A0A140T8Q4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Igkv3-4A0A140T8Q4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Igkv3-4A0A140T8Q4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Igkv3-4A0A140T8Q4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Igkv3-4A0A140T8Q4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Igkv3-4A0A140T8Q4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Igkv3-4A0A140T8Q4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
Igkv3-4A0A140T8Q4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Igkv3-4A0A140T8Q4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Igkv3-4A0A140T8Q4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Igkv3-4A0A140T8Q4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Igkv3-4A0A140T8Q4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC14.83□□□□□ -0.04
Igkv3-4A0A140T8Q4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igkv3-4A0A140T8Q4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igkv3-4A0A140T8Q4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igkv3-4A0A140T8Q4 Gm26115-201ENSMUST00000175605 87 ntBASIC14.82□□□□□ -0.04
Igkv3-4A0A140T8Q4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igkv3-4A0A140T8Q4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igkv3-4A0A140T8Q4 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC14.82□□□□□ -0.04
Igkv3-4A0A140T8Q4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Igkv3-4A0A140T8Q4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Igkv3-4A0A140T8Q4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
Igkv3-4A0A140T8Q4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Igkv3-4A0A140T8Q4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.81□□□□□ -0.04
Igkv3-4A0A140T8Q4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Igkv3-4A0A140T8Q4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv3-4A0A140T8Q4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv3-4A0A140T8Q4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv3-4A0A140T8Q4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Igkv3-4A0A140T8Q4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv3-4A0A140T8Q4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Igkv3-4A0A140T8Q4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igkv3-4A0A140T8Q4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC14.79□□□□□ -0.04
Igkv3-4A0A140T8Q4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igkv3-4A0A140T8Q4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Igkv3-4A0A140T8Q4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.04
Igkv3-4A0A140T8Q4 Gm8109-201ENSMUST00000194076 746 ntBASIC14.77□□□□□ -0.05
Igkv3-4A0A140T8Q4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Igkv3-4A0A140T8Q4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Igkv3-4A0A140T8Q4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Igkv3-4A0A140T8Q4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Igkv3-4A0A140T8Q4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv3-4A0A140T8Q4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv3-4A0A140T8Q4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv3-4A0A140T8Q4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv3-4A0A140T8Q4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv3-4A0A140T8Q4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv3-4A0A140T8Q4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv3-4A0A140T8Q4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Igkv3-4A0A140T8Q4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Igkv3-4A0A140T8Q4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igkv3-4A0A140T8Q4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Igkv3-4A0A140T8Q4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igkv3-4A0A140T8Q4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC14.74□□□□□ -0.05
Igkv3-4A0A140T8Q4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
Igkv3-4A0A140T8Q4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igkv3-4A0A140T8Q4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC14.73□□□□□ -0.05
Igkv3-4A0A140T8Q4 Gm30346-201ENSMUST00000218641 1699 ntBASIC14.73□□□□□ -0.05
Igkv3-4A0A140T8Q4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv3-4A0A140T8Q4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Igkv3-4A0A140T8Q4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv3-4A0A140T8Q4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Igkv3-4A0A140T8Q4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv3-4A0A140T8Q4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv3-4A0A140T8Q4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv3-4A0A140T8Q4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Igkv3-4A0A140T8Q4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igkv3-4A0A140T8Q4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC14.71□□□□□ -0.05
Igkv3-4A0A140T8Q4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igkv3-4A0A140T8Q4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Igkv3-4A0A140T8Q4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Igkv3-4A0A140T8Q4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igkv3-4A0A140T8Q4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igkv3-4A0A140T8Q4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Igkv3-4A0A140T8Q4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Igkv3-4A0A140T8Q4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igkv3-4A0A140T8Q4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC14.7□□□□□ -0.06
Igkv3-4A0A140T8Q4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igkv3-4A0A140T8Q4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Igkv3-4A0A140T8Q4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igkv3-4A0A140T8Q4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igkv3-4A0A140T8Q4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Igkv3-4A0A140T8Q4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igkv3-4A0A140T8Q4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC14.69□□□□□ -0.06
Igkv3-4A0A140T8Q4 Peli2-204ENSMUST00000226513 1320 ntBASIC14.68□□□□□ -0.06
Igkv3-4A0A140T8Q4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igkv3-4A0A140T8Q4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igkv3-4A0A140T8Q4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Igkv3-4A0A140T8Q4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms