Protein–RNA interactions for Protein: A0A140T8P4

Igkv3-9, Immunoglobulin kappa variable 3-9 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-9A0A140T8P4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Igkv3-9A0A140T8P4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv3-9A0A140T8P4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv3-9A0A140T8P4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv3-9A0A140T8P4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv3-9A0A140T8P4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Igkv3-9A0A140T8P4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv3-9A0A140T8P4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv3-9A0A140T8P4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv3-9A0A140T8P4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv3-9A0A140T8P4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv3-9A0A140T8P4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv3-9A0A140T8P4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC16.55■□□□□ 0.24
Igkv3-9A0A140T8P4 AC157572.2-201ENSMUST00000226970 908 ntBASIC16.55■□□□□ 0.24
Igkv3-9A0A140T8P4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv3-9A0A140T8P4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv3-9A0A140T8P4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv3-9A0A140T8P4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv3-9A0A140T8P4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv3-9A0A140T8P4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv3-9A0A140T8P4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv3-9A0A140T8P4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
Igkv3-9A0A140T8P4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Igkv3-9A0A140T8P4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC16.52■□□□□ 0.24
Igkv3-9A0A140T8P4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC16.52■□□□□ 0.24
Igkv3-9A0A140T8P4 Gm9397-201ENSMUST00000200125 605 ntBASIC16.52■□□□□ 0.24
Igkv3-9A0A140T8P4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Igkv3-9A0A140T8P4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Igkv3-9A0A140T8P4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Igkv3-9A0A140T8P4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Igkv3-9A0A140T8P4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.51■□□□□ 0.23
Igkv3-9A0A140T8P4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv3-9A0A140T8P4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv3-9A0A140T8P4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
Igkv3-9A0A140T8P4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv3-9A0A140T8P4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv3-9A0A140T8P4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv3-9A0A140T8P4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16.5■□□□□ 0.23
Igkv3-9A0A140T8P4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Igkv3-9A0A140T8P4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC16.5■□□□□ 0.23
Igkv3-9A0A140T8P4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv3-9A0A140T8P4 Gm45855-201ENSMUST00000212546 880 ntBASIC16.5■□□□□ 0.23
Igkv3-9A0A140T8P4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC16.5■□□□□ 0.23
Igkv3-9A0A140T8P4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv3-9A0A140T8P4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv3-9A0A140T8P4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Igkv3-9A0A140T8P4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC16.49■□□□□ 0.23
Igkv3-9A0A140T8P4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv3-9A0A140T8P4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv3-9A0A140T8P4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv3-9A0A140T8P4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Igkv3-9A0A140T8P4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Igkv3-9A0A140T8P4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv3-9A0A140T8P4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Igkv3-9A0A140T8P4 Gm24970-201ENSMUST00000175582 82 ntBASIC16.48■□□□□ 0.23
Igkv3-9A0A140T8P4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv3-9A0A140T8P4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv3-9A0A140T8P4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv3-9A0A140T8P4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Igkv3-9A0A140T8P4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv3-9A0A140T8P4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC16.45■□□□□ 0.22
Igkv3-9A0A140T8P4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv3-9A0A140T8P4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv3-9A0A140T8P4 Pcf11-205ENSMUST00000208255 1720 ntBASIC16.44■□□□□ 0.22
Igkv3-9A0A140T8P4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv3-9A0A140T8P4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Igkv3-9A0A140T8P4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv3-9A0A140T8P4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv3-9A0A140T8P4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv3-9A0A140T8P4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv3-9A0A140T8P4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv3-9A0A140T8P4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Igkv3-9A0A140T8P4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv3-9A0A140T8P4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv3-9A0A140T8P4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC16.4■□□□□ 0.22
Igkv3-9A0A140T8P4 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv3-9A0A140T8P4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv3-9A0A140T8P4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv3-9A0A140T8P4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv3-9A0A140T8P4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC16.38■□□□□ 0.21
Igkv3-9A0A140T8P4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv3-9A0A140T8P4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC16.38■□□□□ 0.21
Igkv3-9A0A140T8P4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv3-9A0A140T8P4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Igkv3-9A0A140T8P4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Igkv3-9A0A140T8P4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv3-9A0A140T8P4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv3-9A0A140T8P4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv3-9A0A140T8P4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv3-9A0A140T8P4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC16.36■□□□□ 0.21
Igkv3-9A0A140T8P4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv3-9A0A140T8P4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv3-9A0A140T8P4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Igkv3-9A0A140T8P4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.34■□□□□ 0.21
Igkv3-9A0A140T8P4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Igkv3-9A0A140T8P4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Igkv3-9A0A140T8P4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Igkv3-9A0A140T8P4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv3-9A0A140T8P4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv3-9A0A140T8P4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms