Protein–RNA interactions for Protein: A0A140T8M7

Rpl23a-ps3, Ribosomal protein L23A, pseudogene 3, mousemouse

Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl23a-ps3A0A140T8M7 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.79■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Gm9397-201ENSMUST00000200125 605 ntBASIC19.75■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.75■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.72■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.71■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.7■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.7■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.7■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.65■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.65■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.64■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.62■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.62■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.61■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.58■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Gm24970-201ENSMUST00000175582 82 ntBASIC19.57■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.56■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms