Protein–RNA interactions for Protein: A0A140T8M7

Rpl23a-ps3, Ribosomal protein L23A, pseudogene 3, mousemouse

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl23a-ps3A0A140T8M7 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.79■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpl23a-ps3A0A140T8M7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Gm9397-201ENSMUST00000200125 605 ntBASIC19.75■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.75■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.72■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.71■□□□□ 0.75
Rpl23a-ps3A0A140T8M7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.7■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.7■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.7■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.65■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.65■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Rpl23a-ps3A0A140T8M7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.64■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.62■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.62■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.61■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rpl23a-ps3A0A140T8M7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.58■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Gm24970-201ENSMUST00000175582 82 ntBASIC19.57■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.56■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms