Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Igkv4-53A0A0G2JFC6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Igkv4-53A0A0G2JFC6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC16.81■□□□□ 0.28
Igkv4-53A0A0G2JFC6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Igkv4-53A0A0G2JFC6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Igkv4-53A0A0G2JFC6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Igkv4-53A0A0G2JFC6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv4-53A0A0G2JFC6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv4-53A0A0G2JFC6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv4-53A0A0G2JFC6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv4-53A0A0G2JFC6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv4-53A0A0G2JFC6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC16.78■□□□□ 0.28
Igkv4-53A0A0G2JFC6 AC157572.2-201ENSMUST00000226970 908 ntBASIC16.78■□□□□ 0.28
Igkv4-53A0A0G2JFC6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv4-53A0A0G2JFC6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv4-53A0A0G2JFC6 Gm24970-201ENSMUST00000175582 82 ntBASIC16.77■□□□□ 0.28
Igkv4-53A0A0G2JFC6 Gm45855-201ENSMUST00000212546 880 ntBASIC16.77■□□□□ 0.28
Igkv4-53A0A0G2JFC6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv4-53A0A0G2JFC6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC16.76■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Pcf11-205ENSMUST00000208255 1720 ntBASIC16.74■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Igkv4-53A0A0G2JFC6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC16.73■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.72■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv4-53A0A0G2JFC6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Igkv4-53A0A0G2JFC6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv4-53A0A0G2JFC6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv4-53A0A0G2JFC6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Igkv4-53A0A0G2JFC6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Igkv4-53A0A0G2JFC6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv4-53A0A0G2JFC6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv4-53A0A0G2JFC6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Igkv4-53A0A0G2JFC6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv4-53A0A0G2JFC6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv4-53A0A0G2JFC6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv4-53A0A0G2JFC6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv4-53A0A0G2JFC6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv4-53A0A0G2JFC6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv4-53A0A0G2JFC6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC16.67■□□□□ 0.26
Igkv4-53A0A0G2JFC6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv4-53A0A0G2JFC6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv4-53A0A0G2JFC6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv4-53A0A0G2JFC6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC16.66■□□□□ 0.26
Igkv4-53A0A0G2JFC6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Igkv4-53A0A0G2JFC6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv4-53A0A0G2JFC6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Igkv4-53A0A0G2JFC6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv4-53A0A0G2JFC6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv4-53A0A0G2JFC6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv4-53A0A0G2JFC6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv4-53A0A0G2JFC6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16.65■□□□□ 0.26
Igkv4-53A0A0G2JFC6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Igkv4-53A0A0G2JFC6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv4-53A0A0G2JFC6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv4-53A0A0G2JFC6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC16.64■□□□□ 0.25
Igkv4-53A0A0G2JFC6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv4-53A0A0G2JFC6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv4-53A0A0G2JFC6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv4-53A0A0G2JFC6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv4-53A0A0G2JFC6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv4-53A0A0G2JFC6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv4-53A0A0G2JFC6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv4-53A0A0G2JFC6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv4-53A0A0G2JFC6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv4-53A0A0G2JFC6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv4-53A0A0G2JFC6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv4-53A0A0G2JFC6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv4-53A0A0G2JFC6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv4-53A0A0G2JFC6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv4-53A0A0G2JFC6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
Igkv4-53A0A0G2JFC6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv4-53A0A0G2JFC6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv4-53A0A0G2JFC6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv4-53A0A0G2JFC6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv4-53A0A0G2JFC6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv4-53A0A0G2JFC6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv4-53A0A0G2JFC6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Igkv4-53A0A0G2JFC6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 116.5 ms