Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Igkv8-28A0A0G2JE47 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Igkv8-28A0A0G2JE47 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Igkv8-28A0A0G2JE47 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Igkv8-28A0A0G2JE47 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Igkv8-28A0A0G2JE47 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Igkv8-28A0A0G2JE47 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Igkv8-28A0A0G2JE47 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Igkv8-28A0A0G2JE47 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igkv8-28A0A0G2JE47 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igkv8-28A0A0G2JE47 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igkv8-28A0A0G2JE47 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igkv8-28A0A0G2JE47 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igkv8-28A0A0G2JE47 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC14.85□□□□□ -0.03
Igkv8-28A0A0G2JE47 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Igkv8-28A0A0G2JE47 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Igkv8-28A0A0G2JE47 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC14.84□□□□□ -0.03
Igkv8-28A0A0G2JE47 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC14.84□□□□□ -0.03
Igkv8-28A0A0G2JE47 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Igkv8-28A0A0G2JE47 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Igkv8-28A0A0G2JE47 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Igkv8-28A0A0G2JE47 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Igkv8-28A0A0G2JE47 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Igkv8-28A0A0G2JE47 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC14.83□□□□□ -0.04
Igkv8-28A0A0G2JE47 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Igkv8-28A0A0G2JE47 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Igkv8-28A0A0G2JE47 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igkv8-28A0A0G2JE47 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igkv8-28A0A0G2JE47 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Igkv8-28A0A0G2JE47 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Igkv8-28A0A0G2JE47 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Igkv8-28A0A0G2JE47 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Igkv8-28A0A0G2JE47 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv8-28A0A0G2JE47 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC14.8□□□□□ -0.04
Igkv8-28A0A0G2JE47 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv8-28A0A0G2JE47 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv8-28A0A0G2JE47 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igkv8-28A0A0G2JE47 Gm27322-201ENSMUST00000184007 104 ntBASIC14.79□□□□□ -0.04
Igkv8-28A0A0G2JE47 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC14.79□□□□□ -0.04
Igkv8-28A0A0G2JE47 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igkv8-28A0A0G2JE47 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Igkv8-28A0A0G2JE47 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC14.78□□□□□ -0.04
Igkv8-28A0A0G2JE47 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Igkv8-28A0A0G2JE47 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC14.78□□□□□ -0.04
Igkv8-28A0A0G2JE47 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Igkv8-28A0A0G2JE47 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Igkv8-28A0A0G2JE47 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Igkv8-28A0A0G2JE47 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Igkv8-28A0A0G2JE47 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Igkv8-28A0A0G2JE47 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Igkv8-28A0A0G2JE47 Il17rd-202ENSMUST00000223942 2186 ntBASIC14.77□□□□□ -0.04
Igkv8-28A0A0G2JE47 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Igkv8-28A0A0G2JE47 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Igkv8-28A0A0G2JE47 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv8-28A0A0G2JE47 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Igkv8-28A0A0G2JE47 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv8-28A0A0G2JE47 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv8-28A0A0G2JE47 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Igkv8-28A0A0G2JE47 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Igkv8-28A0A0G2JE47 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Igkv8-28A0A0G2JE47 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igkv8-28A0A0G2JE47 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igkv8-28A0A0G2JE47 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igkv8-28A0A0G2JE47 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igkv8-28A0A0G2JE47 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Igkv8-28A0A0G2JE47 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igkv8-28A0A0G2JE47 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC14.73□□□□□ -0.05
Igkv8-28A0A0G2JE47 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv8-28A0A0G2JE47 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv8-28A0A0G2JE47 AC122428.3-201ENSMUST00000215551 2290 ntBASIC14.73□□□□□ -0.05
Igkv8-28A0A0G2JE47 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv8-28A0A0G2JE47 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv8-28A0A0G2JE47 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv8-28A0A0G2JE47 Gm17641-201ENSMUST00000166328 2350 ntBASIC14.72□□□□□ -0.05
Igkv8-28A0A0G2JE47 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv8-28A0A0G2JE47 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Igkv8-28A0A0G2JE47 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv8-28A0A0G2JE47 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv8-28A0A0G2JE47 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igkv8-28A0A0G2JE47 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Igkv8-28A0A0G2JE47 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igkv8-28A0A0G2JE47 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC14.71□□□□□ -0.05
Igkv8-28A0A0G2JE47 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Igkv8-28A0A0G2JE47 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igkv8-28A0A0G2JE47 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Igkv8-28A0A0G2JE47 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Igkv8-28A0A0G2JE47 Gm17082-201ENSMUST00000166043 1091 ntBASIC14.7□□□□□ -0.06
Igkv8-28A0A0G2JE47 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igkv8-28A0A0G2JE47 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Igkv8-28A0A0G2JE47 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igkv8-28A0A0G2JE47 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igkv8-28A0A0G2JE47 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igkv8-28A0A0G2JE47 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igkv8-28A0A0G2JE47 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Igkv8-28A0A0G2JE47 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igkv8-28A0A0G2JE47 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
Igkv8-28A0A0G2JE47 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Igkv8-28A0A0G2JE47 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igkv8-28A0A0G2JE47 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC14.68□□□□□ -0.06
Igkv8-28A0A0G2JE47 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms