Protein–RNA interactions for Protein: A0A0B4J1H8

Igkv1-133, Immunoglobulin kappa variable 1-133 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-133A0A0B4J1H8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv1-133A0A0B4J1H8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv1-133A0A0B4J1H8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Igkv1-133A0A0B4J1H8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Igkv1-133A0A0B4J1H8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv1-133A0A0B4J1H8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv1-133A0A0B4J1H8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv1-133A0A0B4J1H8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv1-133A0A0B4J1H8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Igkv1-133A0A0B4J1H8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Igkv1-133A0A0B4J1H8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Igkv1-133A0A0B4J1H8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.35■□□□□ 0.53
Igkv1-133A0A0B4J1H8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Igkv1-133A0A0B4J1H8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Igkv1-133A0A0B4J1H8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.34■□□□□ 0.53
Igkv1-133A0A0B4J1H8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv1-133A0A0B4J1H8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv1-133A0A0B4J1H8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv1-133A0A0B4J1H8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Igkv1-133A0A0B4J1H8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Igkv1-133A0A0B4J1H8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Igkv1-133A0A0B4J1H8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Igkv1-133A0A0B4J1H8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Igkv1-133A0A0B4J1H8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.29■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.27■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv1-133A0A0B4J1H8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Igkv1-133A0A0B4J1H8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv1-133A0A0B4J1H8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.26■□□□□ 0.51
Igkv1-133A0A0B4J1H8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv1-133A0A0B4J1H8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv1-133A0A0B4J1H8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv1-133A0A0B4J1H8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv1-133A0A0B4J1H8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Igkv1-133A0A0B4J1H8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv1-133A0A0B4J1H8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv1-133A0A0B4J1H8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv1-133A0A0B4J1H8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv1-133A0A0B4J1H8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv1-133A0A0B4J1H8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.23■□□□□ 0.51
Igkv1-133A0A0B4J1H8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv1-133A0A0B4J1H8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv1-133A0A0B4J1H8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Igkv1-133A0A0B4J1H8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv1-133A0A0B4J1H8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.22■□□□□ 0.51
Igkv1-133A0A0B4J1H8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv1-133A0A0B4J1H8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv1-133A0A0B4J1H8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.21■□□□□ 0.51
Igkv1-133A0A0B4J1H8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv1-133A0A0B4J1H8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv1-133A0A0B4J1H8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv1-133A0A0B4J1H8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv1-133A0A0B4J1H8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv1-133A0A0B4J1H8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv1-133A0A0B4J1H8 Gm16148-201ENSMUST00000119653 893 ntBASIC18.19■□□□□ 0.5
Igkv1-133A0A0B4J1H8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv1-133A0A0B4J1H8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv1-133A0A0B4J1H8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Igkv1-133A0A0B4J1H8 Gm24804-201ENSMUST00000174982 85 ntBASIC18.18■□□□□ 0.5
Igkv1-133A0A0B4J1H8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv1-133A0A0B4J1H8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv1-133A0A0B4J1H8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv1-133A0A0B4J1H8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv1-133A0A0B4J1H8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.17■□□□□ 0.5
Igkv1-133A0A0B4J1H8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv1-133A0A0B4J1H8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Igkv1-133A0A0B4J1H8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Igkv1-133A0A0B4J1H8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igkv1-133A0A0B4J1H8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Igkv1-133A0A0B4J1H8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igkv1-133A0A0B4J1H8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.15■□□□□ 0.5
Igkv1-133A0A0B4J1H8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv1-133A0A0B4J1H8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv1-133A0A0B4J1H8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv1-133A0A0B4J1H8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv1-133A0A0B4J1H8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Igkv1-133A0A0B4J1H8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms