Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6d-7A0A075B6B0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6d-7A0A075B6B0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6d-7A0A075B6B0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6d-7A0A075B6B0 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.28■□□□□ 0.52
Trav6d-7A0A075B6B0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6d-7A0A075B6B0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav6d-7A0A075B6B0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav6d-7A0A075B6B0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav6d-7A0A075B6B0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav6d-7A0A075B6B0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trav6d-7A0A075B6B0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Trav6d-7A0A075B6B0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.26■□□□□ 0.51
Trav6d-7A0A075B6B0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6d-7A0A075B6B0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6d-7A0A075B6B0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.24■□□□□ 0.51
Trav6d-7A0A075B6B0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6d-7A0A075B6B0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6d-7A0A075B6B0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
Trav6d-7A0A075B6B0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6d-7A0A075B6B0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6d-7A0A075B6B0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trav6d-7A0A075B6B0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6d-7A0A075B6B0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6d-7A0A075B6B0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.21■□□□□ 0.51
Trav6d-7A0A075B6B0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6d-7A0A075B6B0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.2■□□□□ 0.5
Trav6d-7A0A075B6B0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6d-7A0A075B6B0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6d-7A0A075B6B0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6d-7A0A075B6B0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Trav6d-7A0A075B6B0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6d-7A0A075B6B0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6d-7A0A075B6B0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trav6d-7A0A075B6B0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6d-7A0A075B6B0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6d-7A0A075B6B0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.17■□□□□ 0.5
Trav6d-7A0A075B6B0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6d-7A0A075B6B0 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.17■□□□□ 0.5
Trav6d-7A0A075B6B0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.17■□□□□ 0.5
Trav6d-7A0A075B6B0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6d-7A0A075B6B0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav6d-7A0A075B6B0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.16■□□□□ 0.5
Trav6d-7A0A075B6B0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav6d-7A0A075B6B0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav6d-7A0A075B6B0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav6d-7A0A075B6B0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Trav6d-7A0A075B6B0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6d-7A0A075B6B0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Trav6d-7A0A075B6B0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6d-7A0A075B6B0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trav6d-7A0A075B6B0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6d-7A0A075B6B0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6d-7A0A075B6B0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6d-7A0A075B6B0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trav6d-7A0A075B6B0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6d-7A0A075B6B0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6d-7A0A075B6B0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trav6d-7A0A075B6B0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6d-7A0A075B6B0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6d-7A0A075B6B0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trav6d-7A0A075B6B0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav6d-7A0A075B6B0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trav6d-7A0A075B6B0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6d-7A0A075B6B0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.09■□□□□ 0.49
Trav6d-7A0A075B6B0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6d-7A0A075B6B0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trav6d-7A0A075B6B0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6d-7A0A075B6B0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6d-7A0A075B6B0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trav6d-7A0A075B6B0 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.08■□□□□ 0.48
Trav6d-7A0A075B6B0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav6d-7A0A075B6B0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav6d-7A0A075B6B0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6d-7A0A075B6B0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6d-7A0A075B6B0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6d-7A0A075B6B0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6d-7A0A075B6B0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6d-7A0A075B6B0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6d-7A0A075B6B0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6d-7A0A075B6B0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6d-7A0A075B6B0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.05■□□□□ 0.48
Trav6d-7A0A075B6B0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6d-7A0A075B6B0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6d-7A0A075B6B0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6d-7A0A075B6B0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6d-7A0A075B6B0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.03■□□□□ 0.48
Trav6d-7A0A075B6B0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6d-7A0A075B6B0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6d-7A0A075B6B0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Trav6d-7A0A075B6B0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6d-7A0A075B6B0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6d-7A0A075B6B0 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.03■□□□□ 0.48
Trav6d-7A0A075B6B0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6d-7A0A075B6B0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav6d-7A0A075B6B0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav6d-7A0A075B6B0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav6d-7A0A075B6B0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav6d-7A0A075B6B0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav6d-7A0A075B6B0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms