Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav9d-1A0A075B699 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trav9d-1A0A075B699 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Trav9d-1A0A075B699 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav9d-1A0A075B699 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav9d-1A0A075B699 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav9d-1A0A075B699 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav9d-1A0A075B699 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.32■□□□□ 0.52
Trav9d-1A0A075B699 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav9d-1A0A075B699 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav9d-1A0A075B699 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav9d-1A0A075B699 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trav9d-1A0A075B699 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav9d-1A0A075B699 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav9d-1A0A075B699 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav9d-1A0A075B699 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.3■□□□□ 0.52
Trav9d-1A0A075B699 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav9d-1A0A075B699 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav9d-1A0A075B699 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.29■□□□□ 0.52
Trav9d-1A0A075B699 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.29■□□□□ 0.52
Trav9d-1A0A075B699 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.29■□□□□ 0.52
Trav9d-1A0A075B699 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav9d-1A0A075B699 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav9d-1A0A075B699 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trav9d-1A0A075B699 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav9d-1A0A075B699 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav9d-1A0A075B699 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav9d-1A0A075B699 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.28■□□□□ 0.52
Trav9d-1A0A075B699 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav9d-1A0A075B699 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Trav9d-1A0A075B699 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Trav9d-1A0A075B699 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav9d-1A0A075B699 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Trav9d-1A0A075B699 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.24■□□□□ 0.51
Trav9d-1A0A075B699 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.24■□□□□ 0.51
Trav9d-1A0A075B699 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav9d-1A0A075B699 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav9d-1A0A075B699 Zfp131-205ENSMUST00000223812 663 ntBASIC18.23■□□□□ 0.51
Trav9d-1A0A075B699 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav9d-1A0A075B699 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav9d-1A0A075B699 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.22■□□□□ 0.51
Trav9d-1A0A075B699 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav9d-1A0A075B699 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav9d-1A0A075B699 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav9d-1A0A075B699 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav9d-1A0A075B699 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.21■□□□□ 0.51
Trav9d-1A0A075B699 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trav9d-1A0A075B699 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav9d-1A0A075B699 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trav9d-1A0A075B699 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav9d-1A0A075B699 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav9d-1A0A075B699 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav9d-1A0A075B699 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Trav9d-1A0A075B699 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav9d-1A0A075B699 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav9d-1A0A075B699 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav9d-1A0A075B699 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.19■□□□□ 0.5
Trav9d-1A0A075B699 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.18■□□□□ 0.5
Trav9d-1A0A075B699 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav9d-1A0A075B699 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav9d-1A0A075B699 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav9d-1A0A075B699 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav9d-1A0A075B699 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.17■□□□□ 0.5
Trav9d-1A0A075B699 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.17■□□□□ 0.5
Trav9d-1A0A075B699 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.16■□□□□ 0.5
Trav9d-1A0A075B699 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav9d-1A0A075B699 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Trav9d-1A0A075B699 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav9d-1A0A075B699 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav9d-1A0A075B699 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav9d-1A0A075B699 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav9d-1A0A075B699 Gm9397-201ENSMUST00000200125 605 ntBASIC18.15■□□□□ 0.5
Trav9d-1A0A075B699 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav9d-1A0A075B699 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trav9d-1A0A075B699 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav9d-1A0A075B699 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.13■□□□□ 0.49
Trav9d-1A0A075B699 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav9d-1A0A075B699 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trav9d-1A0A075B699 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Trav9d-1A0A075B699 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Trav9d-1A0A075B699 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.11■□□□□ 0.49
Trav9d-1A0A075B699 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav9d-1A0A075B699 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav9d-1A0A075B699 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav9d-1A0A075B699 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav9d-1A0A075B699 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav9d-1A0A075B699 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.1■□□□□ 0.49
Trav9d-1A0A075B699 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.1■□□□□ 0.49
Trav9d-1A0A075B699 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.1■□□□□ 0.49
Trav9d-1A0A075B699 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.1■□□□□ 0.49
Trav9d-1A0A075B699 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav9d-1A0A075B699 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.09■□□□□ 0.49
Trav9d-1A0A075B699 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav9d-1A0A075B699 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav9d-1A0A075B699 Gm24970-201ENSMUST00000175582 82 ntBASIC18.09■□□□□ 0.49
Trav9d-1A0A075B699 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav9d-1A0A075B699 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav9d-1A0A075B699 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Trav9d-1A0A075B699 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav9d-1A0A075B699 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms