Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trav4-2A0A075B638 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav4-2A0A075B638 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav4-2A0A075B638 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav4-2A0A075B638 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.94■□□□□ 0.62
Trav4-2A0A075B638 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trav4-2A0A075B638 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav4-2A0A075B638 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav4-2A0A075B638 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav4-2A0A075B638 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav4-2A0A075B638 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav4-2A0A075B638 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav4-2A0A075B638 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav4-2A0A075B638 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.91■□□□□ 0.62
Trav4-2A0A075B638 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav4-2A0A075B638 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav4-2A0A075B638 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav4-2A0A075B638 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav4-2A0A075B638 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav4-2A0A075B638 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Trav4-2A0A075B638 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav4-2A0A075B638 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Trav4-2A0A075B638 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav4-2A0A075B638 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Trav4-2A0A075B638 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav4-2A0A075B638 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav4-2A0A075B638 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav4-2A0A075B638 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav4-2A0A075B638 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Trav4-2A0A075B638 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav4-2A0A075B638 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav4-2A0A075B638 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Trav4-2A0A075B638 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav4-2A0A075B638 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trav4-2A0A075B638 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav4-2A0A075B638 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav4-2A0A075B638 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav4-2A0A075B638 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav4-2A0A075B638 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav4-2A0A075B638 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav4-2A0A075B638 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav4-2A0A075B638 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav4-2A0A075B638 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav4-2A0A075B638 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trav4-2A0A075B638 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav4-2A0A075B638 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav4-2A0A075B638 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav4-2A0A075B638 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trav4-2A0A075B638 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Trav4-2A0A075B638 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.81■□□□□ 0.6
Trav4-2A0A075B638 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav4-2A0A075B638 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trav4-2A0A075B638 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Trav4-2A0A075B638 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav4-2A0A075B638 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trav4-2A0A075B638 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav4-2A0A075B638 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav4-2A0A075B638 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trav4-2A0A075B638 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.78■□□□□ 0.6
Trav4-2A0A075B638 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav4-2A0A075B638 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav4-2A0A075B638 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav4-2A0A075B638 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav4-2A0A075B638 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav4-2A0A075B638 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav4-2A0A075B638 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav4-2A0A075B638 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav4-2A0A075B638 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav4-2A0A075B638 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.76■□□□□ 0.59
Trav4-2A0A075B638 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Trav4-2A0A075B638 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Trav4-2A0A075B638 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav4-2A0A075B638 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav4-2A0A075B638 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav4-2A0A075B638 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav4-2A0A075B638 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav4-2A0A075B638 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav4-2A0A075B638 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Trav4-2A0A075B638 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav4-2A0A075B638 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.71■□□□□ 0.59
Trav4-2A0A075B638 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trav4-2A0A075B638 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav4-2A0A075B638 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trav4-2A0A075B638 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav4-2A0A075B638 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Trav4-2A0A075B638 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav4-2A0A075B638 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav4-2A0A075B638 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav4-2A0A075B638 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav4-2A0A075B638 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav4-2A0A075B638 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trav4-2A0A075B638 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav4-2A0A075B638 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav4-2A0A075B638 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav4-2A0A075B638 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav4-2A0A075B638 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav4-2A0A075B638 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Trav4-2A0A075B638 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav4-2A0A075B638 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.68■□□□□ 0.58
Trav4-2A0A075B638 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms