Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trav9-1A0A075B601 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trav9-1A0A075B601 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trav9-1A0A075B601 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav9-1A0A075B601 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Trav9-1A0A075B601 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav9-1A0A075B601 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.56■□□□□ 0.56
Trav9-1A0A075B601 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav9-1A0A075B601 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Trav9-1A0A075B601 Zfp131-205ENSMUST00000223812 663 ntBASIC18.55■□□□□ 0.56
Trav9-1A0A075B601 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav9-1A0A075B601 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav9-1A0A075B601 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Trav9-1A0A075B601 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav9-1A0A075B601 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav9-1A0A075B601 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav9-1A0A075B601 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.53■□□□□ 0.56
Trav9-1A0A075B601 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.53■□□□□ 0.56
Trav9-1A0A075B601 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav9-1A0A075B601 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav9-1A0A075B601 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.53■□□□□ 0.56
Trav9-1A0A075B601 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav9-1A0A075B601 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Trav9-1A0A075B601 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav9-1A0A075B601 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav9-1A0A075B601 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav9-1A0A075B601 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.51■□□□□ 0.55
Trav9-1A0A075B601 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Trav9-1A0A075B601 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trav9-1A0A075B601 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav9-1A0A075B601 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.5■□□□□ 0.55
Trav9-1A0A075B601 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav9-1A0A075B601 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.49■□□□□ 0.55
Trav9-1A0A075B601 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav9-1A0A075B601 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Trav9-1A0A075B601 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Trav9-1A0A075B601 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav9-1A0A075B601 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.48■□□□□ 0.55
Trav9-1A0A075B601 Gm9397-201ENSMUST00000200125 605 ntBASIC18.48■□□□□ 0.55
Trav9-1A0A075B601 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.48■□□□□ 0.55
Trav9-1A0A075B601 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trav9-1A0A075B601 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trav9-1A0A075B601 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav9-1A0A075B601 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.47■□□□□ 0.55
Trav9-1A0A075B601 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav9-1A0A075B601 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trav9-1A0A075B601 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav9-1A0A075B601 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
Trav9-1A0A075B601 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav9-1A0A075B601 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav9-1A0A075B601 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav9-1A0A075B601 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav9-1A0A075B601 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav9-1A0A075B601 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.43■□□□□ 0.54
Trav9-1A0A075B601 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav9-1A0A075B601 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav9-1A0A075B601 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.42■□□□□ 0.54
Trav9-1A0A075B601 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.42■□□□□ 0.54
Trav9-1A0A075B601 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.42■□□□□ 0.54
Trav9-1A0A075B601 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav9-1A0A075B601 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav9-1A0A075B601 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav9-1A0A075B601 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav9-1A0A075B601 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trav9-1A0A075B601 Gm24970-201ENSMUST00000175582 82 ntBASIC18.4■□□□□ 0.54
Trav9-1A0A075B601 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.4■□□□□ 0.54
Trav9-1A0A075B601 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav9-1A0A075B601 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trav9-1A0A075B601 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav9-1A0A075B601 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav9-1A0A075B601 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.39■□□□□ 0.53
Trav9-1A0A075B601 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Trav9-1A0A075B601 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav9-1A0A075B601 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trav9-1A0A075B601 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.39■□□□□ 0.53
Trav9-1A0A075B601 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav9-1A0A075B601 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav9-1A0A075B601 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav9-1A0A075B601 Gm45855-201ENSMUST00000212546 880 ntBASIC18.38■□□□□ 0.53
Trav9-1A0A075B601 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav9-1A0A075B601 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav9-1A0A075B601 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Trav9-1A0A075B601 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Trav9-1A0A075B601 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav9-1A0A075B601 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav9-1A0A075B601 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav9-1A0A075B601 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Trav9-1A0A075B601 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trav9-1A0A075B601 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav9-1A0A075B601 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav9-1A0A075B601 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav9-1A0A075B601 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav9-1A0A075B601 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav9-1A0A075B601 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav9-1A0A075B601 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.33■□□□□ 0.52
Trav9-1A0A075B601 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav9-1A0A075B601 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav9-1A0A075B601 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav9-1A0A075B601 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav9-1A0A075B601 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms