Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rsph3bQ9DA80 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rsph3bQ9DA80 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rsph3bQ9DA80 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rsph3bQ9DA80 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rsph3bQ9DA80 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.91■□□□□ 0.62
Rsph3bQ9DA80 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rsph3bQ9DA80 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rsph3bQ9DA80 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.91■□□□□ 0.62
Rsph3bQ9DA80 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.91■□□□□ 0.62
Rsph3bQ9DA80 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.91■□□□□ 0.62
Rsph3bQ9DA80 Gm21362-201ENSMUST00000194272 928 ntBASIC18.91■□□□□ 0.62
Rsph3bQ9DA80 Gm7367-201ENSMUST00000057611 492 ntBASIC18.91■□□□□ 0.62
Rsph3bQ9DA80 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rsph3bQ9DA80 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rsph3bQ9DA80 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rsph3bQ9DA80 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rsph3bQ9DA80 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rsph3bQ9DA80 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Rsph3bQ9DA80 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rsph3bQ9DA80 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.9■□□□□ 0.62
Rsph3bQ9DA80 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph3bQ9DA80 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph3bQ9DA80 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph3bQ9DA80 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.9■□□□□ 0.62
Rsph3bQ9DA80 Il3ra-202ENSMUST00000223589 738 ntBASIC18.9■□□□□ 0.62
Rsph3bQ9DA80 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.9■□□□□ 0.62
Rsph3bQ9DA80 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph3bQ9DA80 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph3bQ9DA80 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph3bQ9DA80 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph3bQ9DA80 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph3bQ9DA80 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph3bQ9DA80 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Rsph3bQ9DA80 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rsph3bQ9DA80 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.89■□□□□ 0.62
Rsph3bQ9DA80 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rsph3bQ9DA80 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rsph3bQ9DA80 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rsph3bQ9DA80 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.89■□□□□ 0.61
Rsph3bQ9DA80 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Rsph3bQ9DA80 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Rsph3bQ9DA80 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rsph3bQ9DA80 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rsph3bQ9DA80 Gm7370-201ENSMUST00000219471 767 ntBASIC18.89■□□□□ 0.61
Rsph3bQ9DA80 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Rsph3bQ9DA80 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rsph3bQ9DA80 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rsph3bQ9DA80 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rsph3bQ9DA80 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.89■□□□□ 0.61
Rsph3bQ9DA80 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rsph3bQ9DA80 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rsph3bQ9DA80 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rsph3bQ9DA80 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.89■□□□□ 0.61
Rsph3bQ9DA80 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rsph3bQ9DA80 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rsph3bQ9DA80 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rsph3bQ9DA80 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.88■□□□□ 0.61
Rsph3bQ9DA80 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph3bQ9DA80 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph3bQ9DA80 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph3bQ9DA80 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph3bQ9DA80 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph3bQ9DA80 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph3bQ9DA80 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph3bQ9DA80 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph3bQ9DA80 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph3bQ9DA80 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph3bQ9DA80 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Rsph3bQ9DA80 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph3bQ9DA80 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph3bQ9DA80 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph3bQ9DA80 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph3bQ9DA80 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph3bQ9DA80 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph3bQ9DA80 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.87■□□□□ 0.61
Rsph3bQ9DA80 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph3bQ9DA80 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph3bQ9DA80 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph3bQ9DA80 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph3bQ9DA80 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph3bQ9DA80 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Rsph3bQ9DA80 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.87■□□□□ 0.61
Rsph3bQ9DA80 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph3bQ9DA80 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph3bQ9DA80 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph3bQ9DA80 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph3bQ9DA80 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph3bQ9DA80 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rsph3bQ9DA80 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph3bQ9DA80 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Rsph3bQ9DA80 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rsph3bQ9DA80 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rsph3bQ9DA80 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rsph3bQ9DA80 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rsph3bQ9DA80 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rsph3bQ9DA80 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rsph3bQ9DA80 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rsph3bQ9DA80 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rsph3bQ9DA80 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 118.9 ms