Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 Gm7164-201ENSMUST00000117503 450 ntBASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 Gm2066-201ENSMUST00000118046 389 ntBASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 Gm13213-201ENSMUST00000119668 474 ntBASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 Gm14852-201ENSMUST00000120065 647 ntBASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 Gm14578-201ENSMUST00000122166 391 ntBASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 Gm15147-201ENSMUST00000122263 483 ntBASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 Mir5098-201ENSMUST00000175320 82 ntBASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 Gm27611-201ENSMUST00000184690 108 ntBASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 Gm37030-201ENSMUST00000194254 295 ntBASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 Gm43355-201ENSMUST00000196541 346 ntBASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 Gm44757-201ENSMUST00000206373 157 ntBASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 AC129308.2-201ENSMUST00000224588 789 ntBASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 Gm26055-201ENSMUST00000083038 107 ntBASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 Gm22577-201ENSMUST00000083731 109 ntBASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Prpf38bQ80SY5 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm43197-201ENSMUST00000201493 2583 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm13664-201ENSMUST00000117304 345 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm11862-201ENSMUST00000119678 659 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm23213-201ENSMUST00000122715 313 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm26098-201ENSMUST00000157247 288 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm22916-201ENSMUST00000157616 119 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm24409-201ENSMUST00000157881 152 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm23023-201ENSMUST00000158767 109 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm21842-201ENSMUST00000177552 498 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm21626-201ENSMUST00000177791 498 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm21562-201ENSMUST00000177888 498 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm21539-201ENSMUST00000177925 498 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm21599-201ENSMUST00000178249 498 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm21914-201ENSMUST00000178452 498 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm21723-201ENSMUST00000178692 498 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm21916-201ENSMUST00000178771 498 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm21801-201ENSMUST00000178865 498 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm21633-201ENSMUST00000178941 498 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm21821-201ENSMUST00000179646 498 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm21588-201ENSMUST00000180074 498 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm21780-201ENSMUST00000180128 498 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm21572-201ENSMUST00000180134 498 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm21529-201ENSMUST00000180175 498 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm27754-201ENSMUST00000183340 126 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm29370-202ENSMUST00000187476 499 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm9722-201ENSMUST00000194568 802 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm18551-201ENSMUST00000195594 642 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm43309-201ENSMUST00000200837 458 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm44274-201ENSMUST00000203417 256 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm25134-201ENSMUST00000082646 160 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm37970-201ENSMUST00000193865 1732 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.45□□□□□ -1.54
Prpf38bQ80SY5 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Prpf38bQ80SY5 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC5.44□□□□□ -1.54
Prpf38bQ80SY5 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Prpf38bQ80SY5 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.44□□□□□ -1.54
Prpf38bQ80SY5 Gm14753-201ENSMUST00000118503 246 ntBASIC5.44□□□□□ -1.54
Prpf38bQ80SY5 Gm15075-201ENSMUST00000122187 477 ntBASIC5.44□□□□□ -1.54
Prpf38bQ80SY5 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Prpf38bQ80SY5 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Prpf38bQ80SY5 Gm23534-201ENSMUST00000157539 97 ntBASIC5.44□□□□□ -1.54
Prpf38bQ80SY5 Gm23906-201ENSMUST00000157573 128 ntBASIC5.44□□□□□ -1.54
Prpf38bQ80SY5 Gm3170-201ENSMUST00000168753 850 ntBASIC5.44□□□□□ -1.54
Prpf38bQ80SY5 Gm3348-201ENSMUST00000177813 850 ntBASIC5.44□□□□□ -1.54
Prpf38bQ80SY5 Gm23977-201ENSMUST00000177871 74 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 145.6 ms