Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm23975-201ENSMUST00000082685 106 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Gm24410-201ENSMUST00000083433 107 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Mir128-1-201ENSMUST00000083586 70 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Gm7381-201ENSMUST00000098958 300 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Col18a1P39061 AC173482.1-201ENSMUST00000224494 3815 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
Col18a1P39061 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.5□□□□□ -1.53
Col18a1P39061 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col18a1P39061 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Gm43523-201ENSMUST00000197397 2878 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col18a1P39061 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Col18a1P39061 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col18a1P39061 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col18a1P39061 Gm13345-201ENSMUST00000121928 228 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col18a1P39061 Gm24910-201ENSMUST00000157289 272 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Gm25454-201ENSMUST00000157947 315 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Gm22166-201ENSMUST00000178419 121 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Gm23288-201ENSMUST00000179213 121 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Gm24969-201ENSMUST00000180331 79 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Gm29356-201ENSMUST00000186935 373 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Gm28412-201ENSMUST00000187243 177 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Gm29281-201ENSMUST00000188077 381 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Gm20923-201ENSMUST00000190009 319 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Gm28408-201ENSMUST00000191557 463 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Gm38183-201ENSMUST00000193189 205 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Gm37611-201ENSMUST00000195250 2028 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC5.5□□□□□ -1.53
Col18a1P39061 Gm44058-201ENSMUST00000204335 467 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Gm8132-201ENSMUST00000204938 640 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Olfr1309-201ENSMUST00000207885 964 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 AC123705.2-201ENSMUST00000221653 2009 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 AC144798.1-201ENSMUST00000228120 391 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Gm10088-201ENSMUST00000074116 423 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Gm23679-201ENSMUST00000083161 119 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Gm25005-201ENSMUST00000083812 156 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col18a1P39061 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col18a1P39061 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col18a1P39061 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col18a1P39061 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col18a1P39061 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col18a1P39061 Gm5258-201ENSMUST00000165437 327 ntBASIC5.49□□□□□ -1.53
Col18a1P39061 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC5.49□□□□□ -1.53
Col18a1P39061 Gm26988-201ENSMUST00000183296 945 ntBASIC5.49□□□□□ -1.53
Col18a1P39061 Gm10193-201ENSMUST00000188288 231 ntBASIC5.49□□□□□ -1.53
Col18a1P39061 Gm28951-201ENSMUST00000190742 313 ntBASIC5.49□□□□□ -1.53
Col18a1P39061 Gm8747-201ENSMUST00000195392 751 ntBASIC5.49□□□□□ -1.53
Col18a1P39061 Gm42832-201ENSMUST00000196361 745 ntBASIC5.49□□□□□ -1.53
Col18a1P39061 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC5.49□□□□□ -1.53
Col18a1P39061 Gm44765-201ENSMUST00000206927 601 ntBASIC5.49□□□□□ -1.53
Col18a1P39061 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC5.49□□□□□ -1.53
Col18a1P39061 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Col18a1P39061 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Col18a1P39061 Gm45378-201ENSMUST00000211063 2711 ntBASIC5.48□□□□□ -1.53
Col18a1P39061 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col18a1P39061 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Col18a1P39061 AC167420.1-201ENSMUST00000222999 2121 ntBASIC5.48□□□□□ -1.53
Col18a1P39061 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col18a1P39061 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Col18a1P39061 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Col18a1P39061 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Col18a1P39061 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col18a1P39061 Gm23545-201ENSMUST00000158205 104 ntBASIC5.48□□□□□ -1.53
Col18a1P39061 Gm23579-201ENSMUST00000158528 103 ntBASIC5.48□□□□□ -1.53
Col18a1P39061 Gm25369-201ENSMUST00000158848 132 ntBASIC5.48□□□□□ -1.53
Col18a1P39061 Gm20656-201ENSMUST00000176925 518 ntBASIC5.48□□□□□ -1.53
Col18a1P39061 Gm27315-201ENSMUST00000183977 154 ntBASIC5.48□□□□□ -1.53
Col18a1P39061 Gm9775-201ENSMUST00000189402 331 ntBASIC5.48□□□□□ -1.53
Col18a1P39061 Gm44523-201ENSMUST00000205616 417 ntBASIC5.48□□□□□ -1.53
Col18a1P39061 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC5.48□□□□□ -1.53
Col18a1P39061 Gm19140-201ENSMUST00000209790 421 ntBASIC5.48□□□□□ -1.53
Col18a1P39061 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC5.48□□□□□ -1.53
Col18a1P39061 Gm23404-201ENSMUST00000082543 97 ntBASIC5.48□□□□□ -1.53
Col18a1P39061 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col18a1P39061 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col18a1P39061 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Col18a1P39061 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Col18a1P39061 Gm15101-201ENSMUST00000178818 1502 ntBASIC5.48□□□□□ -1.53
Col18a1P39061 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col18a1P39061 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col18a1P39061 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Col18a1P39061 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col18a1P39061 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Col18a1P39061 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col18a1P39061 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col18a1P39061 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC5.47□□□□□ -1.53
Col18a1P39061 Gm13471-201ENSMUST00000122057 433 ntBASIC5.47□□□□□ -1.53
Col18a1P39061 Gm24627-201ENSMUST00000122764 138 ntBASIC5.47□□□□□ -1.53
Col18a1P39061 Gm22839-201ENSMUST00000158436 304 ntBASIC5.47□□□□□ -1.53
Col18a1P39061 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col18a1P39061 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC5.47□□□□□ -1.53
Col18a1P39061 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col18a1P39061 Gm29229-201ENSMUST00000188874 323 ntBASIC5.47□□□□□ -1.53
Col18a1P39061 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC5.47□□□□□ -1.53
Col18a1P39061 Gm44254-201ENSMUST00000204184 322 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 210.5 ms