Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco4Q9JIS3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco4Q9JIS3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco4Q9JIS3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smco4Q9JIS3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco4Q9JIS3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Smco4Q9JIS3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco4Q9JIS3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco4Q9JIS3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco4Q9JIS3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smco4Q9JIS3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco4Q9JIS3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco4Q9JIS3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco4Q9JIS3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco4Q9JIS3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.99□□□□□ -0.17
Smco4Q9JIS3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco4Q9JIS3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco4Q9JIS3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco4Q9JIS3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Smco4Q9JIS3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.98□□□□□ -0.17
Smco4Q9JIS3 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smco4Q9JIS3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Smco4Q9JIS3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smco4Q9JIS3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smco4Q9JIS3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smco4Q9JIS3 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Smco4Q9JIS3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.98□□□□□ -0.17
Smco4Q9JIS3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smco4Q9JIS3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smco4Q9JIS3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smco4Q9JIS3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC13.98□□□□□ -0.17
Smco4Q9JIS3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC13.98□□□□□ -0.17
Smco4Q9JIS3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smco4Q9JIS3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smco4Q9JIS3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
Smco4Q9JIS3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smco4Q9JIS3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smco4Q9JIS3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smco4Q9JIS3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smco4Q9JIS3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.98□□□□□ -0.17
Smco4Q9JIS3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smco4Q9JIS3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
Smco4Q9JIS3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco4Q9JIS3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco4Q9JIS3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco4Q9JIS3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco4Q9JIS3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco4Q9JIS3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco4Q9JIS3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco4Q9JIS3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smco4Q9JIS3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Smco4Q9JIS3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco4Q9JIS3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Smco4Q9JIS3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smco4Q9JIS3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco4Q9JIS3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco4Q9JIS3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco4Q9JIS3 Gm45444-201ENSMUST00000211394 898 ntBASIC13.97□□□□□ -0.17
Smco4Q9JIS3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco4Q9JIS3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco4Q9JIS3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Smco4Q9JIS3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco4Q9JIS3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco4Q9JIS3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco4Q9JIS3 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.97□□□□□ -0.17
Smco4Q9JIS3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco4Q9JIS3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco4Q9JIS3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Smco4Q9JIS3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Smco4Q9JIS3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smco4Q9JIS3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Smco4Q9JIS3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smco4Q9JIS3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.96□□□□□ -0.17
Smco4Q9JIS3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smco4Q9JIS3 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smco4Q9JIS3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.96□□□□□ -0.17
Smco4Q9JIS3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smco4Q9JIS3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smco4Q9JIS3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smco4Q9JIS3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smco4Q9JIS3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smco4Q9JIS3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC13.96□□□□□ -0.17
Smco4Q9JIS3 Gm5067-201ENSMUST00000170449 1009 ntBASIC13.96□□□□□ -0.17
Smco4Q9JIS3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC13.96□□□□□ -0.17
Smco4Q9JIS3 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smco4Q9JIS3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smco4Q9JIS3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smco4Q9JIS3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.96□□□□□ -0.17
Smco4Q9JIS3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smco4Q9JIS3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Smco4Q9JIS3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smco4Q9JIS3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smco4Q9JIS3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smco4Q9JIS3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smco4Q9JIS3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smco4Q9JIS3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smco4Q9JIS3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Smco4Q9JIS3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Smco4Q9JIS3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smco4Q9JIS3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms