Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim43aQ3TL54 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.38■□□□□ 0.53
Trim43aQ3TL54 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim43aQ3TL54 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim43aQ3TL54 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim43aQ3TL54 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim43aQ3TL54 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim43aQ3TL54 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim43aQ3TL54 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim43aQ3TL54 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trim43aQ3TL54 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim43aQ3TL54 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim43aQ3TL54 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.37■□□□□ 0.53
Trim43aQ3TL54 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim43aQ3TL54 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim43aQ3TL54 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.37■□□□□ 0.53
Trim43aQ3TL54 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim43aQ3TL54 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.37■□□□□ 0.53
Trim43aQ3TL54 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim43aQ3TL54 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim43aQ3TL54 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim43aQ3TL54 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim43aQ3TL54 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim43aQ3TL54 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim43aQ3TL54 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim43aQ3TL54 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim43aQ3TL54 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim43aQ3TL54 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim43aQ3TL54 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim43aQ3TL54 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.36■□□□□ 0.53
Trim43aQ3TL54 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim43aQ3TL54 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim43aQ3TL54 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim43aQ3TL54 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim43aQ3TL54 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim43aQ3TL54 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim43aQ3TL54 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim43aQ3TL54 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43aQ3TL54 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43aQ3TL54 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.35■□□□□ 0.53
Trim43aQ3TL54 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43aQ3TL54 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Trim43aQ3TL54 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trim43aQ3TL54 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43aQ3TL54 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43aQ3TL54 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43aQ3TL54 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.35■□□□□ 0.53
Trim43aQ3TL54 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43aQ3TL54 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43aQ3TL54 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43aQ3TL54 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43aQ3TL54 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43aQ3TL54 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43aQ3TL54 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trim43aQ3TL54 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43aQ3TL54 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43aQ3TL54 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43aQ3TL54 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43aQ3TL54 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim43aQ3TL54 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trim43aQ3TL54 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
Trim43aQ3TL54 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim43aQ3TL54 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.34■□□□□ 0.53
Trim43aQ3TL54 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim43aQ3TL54 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim43aQ3TL54 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim43aQ3TL54 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim43aQ3TL54 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim43aQ3TL54 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim43aQ3TL54 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim43aQ3TL54 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim43aQ3TL54 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim43aQ3TL54 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim43aQ3TL54 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim43aQ3TL54 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Trim43aQ3TL54 Gm2399-201ENSMUST00000104944 225 ntBASIC18.33■□□□□ 0.52
Trim43aQ3TL54 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim43aQ3TL54 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim43aQ3TL54 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim43aQ3TL54 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim43aQ3TL54 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim43aQ3TL54 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim43aQ3TL54 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Trim43aQ3TL54 Zfp783-201ENSMUST00000095946 670 ntBASIC18.33■□□□□ 0.52
Trim43aQ3TL54 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim43aQ3TL54 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim43aQ3TL54 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trim43aQ3TL54 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim43aQ3TL54 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim43aQ3TL54 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim43aQ3TL54 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim43aQ3TL54 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim43aQ3TL54 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim43aQ3TL54 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim43aQ3TL54 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.32■□□□□ 0.52
Trim43aQ3TL54 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim43aQ3TL54 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim43aQ3TL54 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Trim43aQ3TL54 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.32■□□□□ 0.52
Trim43aQ3TL54 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms