Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1aP25118 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1aP25118 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf1aP25118 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1aP25118 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1aP25118 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1aP25118 Gm12896-201ENSMUST00000118430 226 ntBASIC14.53□□□□□ -0.08
Tnfrsf1aP25118 Mir2861-201ENSMUST00000175539 82 ntBASIC14.53□□□□□ -0.08
Tnfrsf1aP25118 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1aP25118 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf1aP25118 Gm10138-203ENSMUST00000206952 366 ntBASIC14.53□□□□□ -0.08
Tnfrsf1aP25118 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1aP25118 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1aP25118 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1aP25118 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1aP25118 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.53□□□□□ -0.08
Tnfrsf1aP25118 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1aP25118 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1aP25118 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf1aP25118 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf1aP25118 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf1aP25118 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf1aP25118 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Tnfrsf1aP25118 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf1aP25118 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf1aP25118 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf1aP25118 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Tnfrsf1aP25118 Mir6349-201ENSMUST00000184059 97 ntBASIC14.52□□□□□ -0.09
Tnfrsf1aP25118 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.52□□□□□ -0.09
Tnfrsf1aP25118 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf1aP25118 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
Tnfrsf1aP25118 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf1aP25118 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.52□□□□□ -0.09
Tnfrsf1aP25118 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf1aP25118 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.51□□□□□ -0.09
Tnfrsf1aP25118 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.51□□□□□ -0.09
Tnfrsf1aP25118 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Tnfrsf1aP25118 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf1aP25118 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf1aP25118 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf1aP25118 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.51□□□□□ -0.09
Tnfrsf1aP25118 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf1aP25118 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf1aP25118 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.51□□□□□ -0.09
Tnfrsf1aP25118 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf1aP25118 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.51□□□□□ -0.09
Tnfrsf1aP25118 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf1aP25118 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.51□□□□□ -0.09
Tnfrsf1aP25118 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf1aP25118 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf1aP25118 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Tnfrsf1aP25118 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Tnfrsf1aP25118 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf1aP25118 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf1aP25118 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Tnfrsf1aP25118 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.5□□□□□ -0.09
Tnfrsf1aP25118 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Tnfrsf1aP25118 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf1aP25118 Dio3-201ENSMUST00000097228 1449 ntBASIC14.5□□□□□ -0.09
Tnfrsf1aP25118 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf1aP25118 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf1aP25118 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf1aP25118 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf1aP25118 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf1aP25118 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf1aP25118 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.5□□□□□ -0.09
Tnfrsf1aP25118 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Tnfrsf1aP25118 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.5□□□□□ -0.09
Tnfrsf1aP25118 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.5□□□□□ -0.09
Tnfrsf1aP25118 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf1aP25118 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.5□□□□□ -0.09
Tnfrsf1aP25118 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Tnfrsf1aP25118 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf1aP25118 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.5□□□□□ -0.09
Tnfrsf1aP25118 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf1aP25118 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf1aP25118 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf1aP25118 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf1aP25118 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf1aP25118 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf1aP25118 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf1aP25118 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Tnfrsf1aP25118 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf1aP25118 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf1aP25118 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf1aP25118 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.49□□□□□ -0.09
Tnfrsf1aP25118 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.49□□□□□ -0.09
Tnfrsf1aP25118 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf1aP25118 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf1aP25118 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf1aP25118 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.49□□□□□ -0.09
Tnfrsf1aP25118 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf1aP25118 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf1aP25118 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf1aP25118 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf1aP25118 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf1aP25118 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf1aP25118 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf1aP25118 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf1aP25118 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms