Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 SDH7YDR511W 402 nt-0.37□□□□□ -2.47
TY1B-HO13535 YJR141WYJR141W 1044 nt-0.37□□□□□ -2.47
TY1B-HO13535 YBL071CYBL071C 309 nt-0.37□□□□□ -2.47
TY1B-HO13535 IPP1YBR011C 864 nt-0.37□□□□□ -2.47
TY1B-HO13535 HMLALPHA2YCL067C 633 nt-0.37□□□□□ -2.47
TY1B-HO13535 MATALPHA2YCR039C 633 nt-0.37□□□□□ -2.47
TY1B-HO13535 HMRA2YCR096C 360 nt-0.37□□□□□ -2.47
TY1B-HO13535 DIE2YGR227W 1578 nt-0.38□□□□□ -2.47
TY1B-HO13535 YCR018C-AYCR018C-A 255 nt-0.38□□□□□ -2.47
TY1B-HO13535 YLR287CYLR287C 1068 nt-0.39□□□□□ -2.47
TY1B-HO13535 BER1YLR412W 825 nt-0.39□□□□□ -2.47
TY1B-HO13535 YNL319WYNL319W 441 nt-0.39□□□□□ -2.47
TY1B-HO13535 YPR170W-AYPR170W-A 186 nt-0.39□□□□□ -2.47
TY1B-HO13535 YJR087WYJR087W 351 nt-0.4□□□□□ -2.47
TY1B-HO13535 YAL066WYAL066W 309 nt-0.4□□□□□ -2.47
TY1B-HO13535 COY1YKL179C 2040 nt-0.42□□□□□ -2.48
TY1B-HO13535 YJL047C-AYJL047C-A 135 nt-0.42□□□□□ -2.48
TY1B-HO13535 YLR334CYLR334C 381 nt-0.42□□□□□ -2.48
TY1B-HO13535 RPM2YML091C 3609 nt-0.42□□□□□ -2.48
TY1B-HO13535 ECL1YGR146C 636 nt-0.42□□□□□ -2.48
TY1B-HO13535 SEC10YLR166C 2616 nt-0.43□□□□□ -2.48
TY1B-HO13535 TAR1YLR154W-C 375 nt-0.43□□□□□ -2.48
TY1B-HO13535 YCR022CYCR022C 345 nt-0.44□□□□□ -2.48
TY1B-HO13535 YDL185C-AYDL185C-A 228 nt-0.44□□□□□ -2.48
TY1B-HO13535 YIR030W-AYIR030W-A 384 nt-0.44□□□□□ -2.48
TY1B-HO13535 RPS25BYLR333C 327 nt-0.44□□□□□ -2.48
TY1B-HO13535 YOR345CYOR345C 351 nt-0.44□□□□□ -2.48
TY1B-HO13535 RAD61YDR014W 1944 nt-0.44□□□□□ -2.48
TY1B-HO13535 RPF1YHR088W 888 nt-0.45□□□□□ -2.48
TY1B-HO13535 YHR131W-AYHR131W-A 246 nt-0.45□□□□□ -2.48
TY1B-HO13535 YDR210WYDR210W 228 nt-0.46□□□□□ -2.48
TY1B-HO13535 tN(GUU)QtN(GUU)Q 71 nt-0.46□□□□□ -2.48
TY1B-HO13535 YNR077CYNR077C 255 nt-0.46□□□□□ -2.48
TY1B-HO13535 ZEO1YOL109W 342 nt-0.46□□□□□ -2.48
TY1B-HO13535 SGF11YPL047W 300 nt-0.46□□□□□ -2.48
TY1B-HO13535 YPR002C-AYPR002C-A 198 nt-0.46□□□□□ -2.48
TY1B-HO13535 YHR007C-AYHR007C-A 216 nt-0.47□□□□□ -2.48
TY1B-HO13535 YOL038C-AYOL038C-A 96 nt-0.47□□□□□ -2.48
TY1B-HO13535 YPL229WYPL229W 621 nt-0.47□□□□□ -2.48
TY1B-HO13535 YCR100CYCR100C 951 nt-0.47□□□□□ -2.49
TY1B-HO13535 YDL016CYDL016C 303 nt-0.48□□□□□ -2.49
TY1B-HO13535 YDR426CYDR426C 378 nt-0.48□□□□□ -2.49
TY1B-HO13535 YPL068CYPL068C 882 nt-0.48□□□□□ -2.49
TY1B-HO13535 YML007C-AYML007C-A 111 nt-0.5□□□□□ -2.49
TY1B-HO13535 YNL303WYNL303W 348 nt-0.51□□□□□ -2.49
TY1B-HO13535 tT(UGU)G1tT(UGU)G1 72 nt-0.52□□□□□ -2.49
TY1B-HO13535 tT(UGU)G2tT(UGU)G2 72 nt-0.52□□□□□ -2.49
TY1B-HO13535 tT(UGU)PtT(UGU)P 72 nt-0.52□□□□□ -2.49
TY1B-HO13535 FYV7YLR068W 456 nt-0.52□□□□□ -2.49
TY1B-HO13535 YPL205CYPL205C 345 nt-0.52□□□□□ -2.49
TY1B-HO13535 PCF11YDR228C 1881 nt-0.54□□□□□ -2.5
TY1B-HO13535 YJL120WYJL120W 324 nt-0.54□□□□□ -2.5
TY1B-HO13535 YLR282CYLR282C 342 nt-0.54□□□□□ -2.5
TY1B-HO13535 GRX5YPL059W 453 nt-0.55□□□□□ -2.5
TY1B-HO13535 YBR099CYBR099C 384 nt-0.57□□□□□ -2.5
TY1B-HO13535 MPC1YGL080W 393 nt-0.58□□□□□ -2.5
TY1B-HO13535 YMR158W-BYMR158W-B 321 nt-0.58□□□□□ -2.5
TY1B-HO13535 SNU13YEL026W 381 nt-0.59□□□□□ -2.5
TY1B-HO13535 YHR138CYHR138C 345 nt-0.59□□□□□ -2.5
TY1B-HO13535 YPR092WYPR092W 306 nt-0.59□□□□□ -2.5
TY1B-HO13535 YLR456WYLR456W 615 nt-0.6□□□□□ -2.5
TY1B-HO13535 YDR366CYDR366C 399 nt-0.6□□□□□ -2.51
TY1B-HO13535 YGL123C-AYGL123C-A 231 nt-0.61□□□□□ -2.51
TY1B-HO13535 YGR174W-AYGR174W-A 87 nt-0.61□□□□□ -2.51
TY1B-HO13535 AIM29YKR074W 468 nt-0.61□□□□□ -2.51
TY1B-HO13535 YKL083WYKL083W 615 nt-0.62□□□□□ -2.51
TY1B-HO13535 YLR041WYLR041W 321 nt-0.62□□□□□ -2.51
TY1B-HO13535 YAR047CYAR047C 321 nt-0.62□□□□□ -2.51
TY1B-HO13535 snR33snR33 183 nt-0.62□□□□□ -2.51
TY1B-HO13535 snR54snR54 86 nt-0.62□□□□□ -2.51
TY1B-HO13535 GPI15YNL038W 690 nt-0.62□□□□□ -2.51
TY1B-HO13535 YOR192C-CYOR192C-C 237 nt-0.62□□□□□ -2.51
TY1B-HO13535 YBR072C-AYBR072C-A 162 nt-0.62□□□□□ -2.51
TY1B-HO13535 YFL012WYFL012W 447 nt-0.63□□□□□ -2.51
TY1B-HO13535 YAR029WYAR029W 225 nt-0.63□□□□□ -2.51
TY1B-HO13535 YBR223W-AYBR223W-A 120 nt-0.64□□□□□ -2.51
TY1B-HO13535 YKL100W-AYKL100W-A 90 nt-0.65□□□□□ -2.51
TY1B-HO13535 EST1YLR233C 2100 nt-0.65□□□□□ -2.51
TY1B-HO13535 YDR354C-AYDR354C-A 144 nt-0.65□□□□□ -2.51
TY1B-HO13535 AGA2YGL032C 264 nt-0.66□□□□□ -2.52
TY1B-HO13535 YIL071W-AYIL071W-A 477 nt-0.66□□□□□ -2.52
TY1B-HO13535 YCR038W-AYCR038W-A 126 nt-0.68□□□□□ -2.52
TY1B-HO13535 YLR269CYLR269C 351 nt-0.68□□□□□ -2.52
TY1B-HO13535 BLI1YKL061W 342 nt-0.68□□□□□ -2.52
TY1B-HO13535 YNL067W-BYNL067W-B 141 nt-0.68□□□□□ -2.52
TY1B-HO13535 YHR130CYHR130C 336 nt-0.69□□□□□ -2.52
TY1B-HO13535 YER006C-AYER006C-A 318 nt-0.7□□□□□ -2.52
TY1B-HO13535 tA(UGC)QtA(UGC)Q 76 nt-0.7□□□□□ -2.52
TY1B-HO13535 YFR009W-AYFR009W-A 258 nt-0.71□□□□□ -2.52
TY1B-HO13535 EAF6YJR082C 342 nt-0.71□□□□□ -2.52
TY1B-HO13535 PCC1YKR095W-A 267 nt-0.71□□□□□ -2.52
TY1B-HO13535 YLR285C-AYLR285C-A 171 nt-0.71□□□□□ -2.52
TY1B-HO13535 YHR125WYHR125W 306 nt-0.72□□□□□ -2.52
TY1B-HO13535 YIL002W-AYIL002W-A 210 nt-0.73□□□□□ -2.53
TY1B-HO13535 YER084W-AYER084W-A 513 nt-0.74□□□□□ -2.53
TY1B-HO13535 SDH6YDR379C-A 240 nt-0.75□□□□□ -2.53
TY1B-HO13535 Q0255Q0255 1419 nt-0.75□□□□□ -2.53
TY1B-HO13535 CBS1YDL069C 690 nt-0.75□□□□□ -2.53
TY1B-HO13535 RPS27BYHR021C 249 nt-0.76□□□□□ -2.53
TY1B-HO13535 YEL020C-BYEL020C-B 198 nt-0.77□□□□□ -2.53
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms