Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm28625-201ENSMUST00000188309 205 ntBASIC5.6□□□□□ -1.51
Prpf38bQ80SY5 Gm29196-201ENSMUST00000189239 618 ntBASIC5.6□□□□□ -1.51
Prpf38bQ80SY5 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Prpf38bQ80SY5 Gm37701-201ENSMUST00000192947 1100 ntBASIC5.6□□□□□ -1.51
Prpf38bQ80SY5 Gm44472-201ENSMUST00000204922 943 ntBASIC5.6□□□□□ -1.51
Prpf38bQ80SY5 Gm44776-201ENSMUST00000207212 381 ntBASIC5.6□□□□□ -1.51
Prpf38bQ80SY5 Gm45344-201ENSMUST00000211610 341 ntBASIC5.6□□□□□ -1.51
Prpf38bQ80SY5 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5.6□□□□□ -1.51
Prpf38bQ80SY5 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC5.6□□□□□ -1.51
Prpf38bQ80SY5 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.6□□□□□ -1.51
Prpf38bQ80SY5 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.6□□□□□ -1.51
Prpf38bQ80SY5 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Prpf38bQ80SY5 Gm22826-201ENSMUST00000083774 165 ntBASIC5.6□□□□□ -1.51
Prpf38bQ80SY5 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.6□□□□□ -1.51
Prpf38bQ80SY5 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.6□□□□□ -1.51
Prpf38bQ80SY5 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.6□□□□□ -1.51
Prpf38bQ80SY5 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Prpf38bQ80SY5 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Prpf38bQ80SY5 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Prpf38bQ80SY5 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Prpf38bQ80SY5 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Prpf38bQ80SY5 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.6□□□□□ -1.51
Prpf38bQ80SY5 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Prpf38bQ80SY5 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Prpf38bQ80SY5 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Gm11975-201ENSMUST00000118772 481 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Gm11826-201ENSMUST00000118781 438 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Gm12379-201ENSMUST00000119607 391 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Gm12884-201ENSMUST00000120371 325 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Gm13511-201ENSMUST00000121167 363 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Gm12466-201ENSMUST00000121199 620 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Gm22791-201ENSMUST00000157232 145 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Gm25278-201ENSMUST00000157267 120 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Gm22059-201ENSMUST00000157544 104 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Gm22849-201ENSMUST00000157713 307 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Gm23411-201ENSMUST00000157988 62 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Gm17119-201ENSMUST00000163943 280 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Gm37568-201ENSMUST00000191755 364 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Gm6520-201ENSMUST00000200636 410 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Gm5322-201ENSMUST00000206142 699 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Gm18016-201ENSMUST00000216119 801 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 AC153506.2-201ENSMUST00000218051 257 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Gm46194-201ENSMUST00000218136 320 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 AC124346.1-201ENSMUST00000218539 364 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 AC074315.1-201ENSMUST00000228801 214 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Gm25141-201ENSMUST00000083177 107 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Gm24764-201ENSMUST00000083686 199 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.59□□□□□ -1.51
Prpf38bQ80SY5 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
Prpf38bQ80SY5 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
Prpf38bQ80SY5 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.59□□□□□ -1.52
Prpf38bQ80SY5 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Prpf38bQ80SY5 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Prpf38bQ80SY5 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Prpf38bQ80SY5 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
Prpf38bQ80SY5 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Prpf38bQ80SY5 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.58□□□□□ -1.52
Prpf38bQ80SY5 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Prpf38bQ80SY5 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.58□□□□□ -1.52
Prpf38bQ80SY5 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Prpf38bQ80SY5 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Prpf38bQ80SY5 Mir19b-1-201ENSMUST00000102301 87 ntBASIC5.58□□□□□ -1.52
Prpf38bQ80SY5 Gm11576-201ENSMUST00000117433 417 ntBASIC5.58□□□□□ -1.52
Prpf38bQ80SY5 Gm14868-201ENSMUST00000117840 216 ntBASIC5.58□□□□□ -1.52
Prpf38bQ80SY5 Gm11408-201ENSMUST00000117889 519 ntBASIC5.58□□□□□ -1.52
Prpf38bQ80SY5 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC5.58□□□□□ -1.52
Prpf38bQ80SY5 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.58□□□□□ -1.52
Prpf38bQ80SY5 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC5.58□□□□□ -1.52
Prpf38bQ80SY5 Gm25430-201ENSMUST00000157614 289 ntBASIC5.58□□□□□ -1.52
Prpf38bQ80SY5 Gm22769-201ENSMUST00000158367 98 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 123.8 ms