Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm10794-201ENSMUST00000099624 207 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col18a1P39061 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.72□□□□□ -1.49
Col18a1P39061 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col18a1P39061 Gm43953-201ENSMUST00000203709 2867 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col18a1P39061 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col18a1P39061 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col18a1P39061 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
Col18a1P39061 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col18a1P39061 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col18a1P39061 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 Gm12900-201ENSMUST00000120919 573 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 Gm12358-201ENSMUST00000121842 520 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 Gm27694-201ENSMUST00000184740 86 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 Gm29525-201ENSMUST00000189844 699 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 Gm29523-201ENSMUST00000191415 699 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 Gm29704-201ENSMUST00000196011 253 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col18a1P39061 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC5.72□□□□□ -1.49
Col18a1P39061 Gm45070-201ENSMUST00000208100 246 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 Gm18113-201ENSMUST00000220630 303 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 AC159244.1-201ENSMUST00000220964 594 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 Gm22739-201ENSMUST00000083437 160 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Col18a1P39061 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Col18a1P39061 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col18a1P39061 Gm26696-201ENSMUST00000181941 2848 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col18a1P39061 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Col18a1P39061 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.49
Col18a1P39061 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col18a1P39061 Gm38207-201ENSMUST00000193009 3505 ntBASIC5.71□□□□□ -1.49
Col18a1P39061 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Col18a1P39061 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Col18a1P39061 Gm14365-201ENSMUST00000117535 587 ntBASIC5.71□□□□□ -1.5
Col18a1P39061 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC5.71□□□□□ -1.5
Col18a1P39061 Gm15399-201ENSMUST00000118055 724 ntBASIC5.71□□□□□ -1.5
Col18a1P39061 Defa-ps9-201ENSMUST00000118264 276 ntBASIC5.71□□□□□ -1.5
Col18a1P39061 Gm24592-201ENSMUST00000122505 106 ntBASIC5.71□□□□□ -1.5
Col18a1P39061 Gm19200-201ENSMUST00000182579 1001 ntBASIC5.71□□□□□ -1.5
Col18a1P39061 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC5.71□□□□□ -1.5
Col18a1P39061 Gm5322-201ENSMUST00000206142 699 ntBASIC5.71□□□□□ -1.5
Col18a1P39061 Gm18644-201ENSMUST00000211458 815 ntBASIC5.71□□□□□ -1.5
Col18a1P39061 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC5.71□□□□□ -1.5
Col18a1P39061 Gm35558-203ENSMUST00000222264 204 ntBASIC5.71□□□□□ -1.5
Col18a1P39061 AC122341.1-201ENSMUST00000227291 560 ntBASIC5.71□□□□□ -1.5
Col18a1P39061 Gm23925-201ENSMUST00000082471 132 ntBASIC5.71□□□□□ -1.5
Col18a1P39061 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col18a1P39061 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Col18a1P39061 AC163660.3-201ENSMUST00000224253 1563 ntBASIC5.71□□□□□ -1.5
Col18a1P39061 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
Col18a1P39061 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col18a1P39061 AC155805.1-201ENSMUST00000222419 3808 ntBASIC5.71□□□□□ -1.5
Col18a1P39061 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col18a1P39061 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col18a1P39061 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col18a1P39061 Gm18954-201ENSMUST00000222200 1792 ntBASIC5.71□□□□□ -1.5
Col18a1P39061 Gm37639-201ENSMUST00000191623 2785 ntBASIC5.71□□□□□ -1.5
Col18a1P39061 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 Gm45872-201ENSMUST00000209804 1584 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC5.7□□□□□ -1.5
Col18a1P39061 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Col18a1P39061 Gm15108-201ENSMUST00000116160 803 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 Gm22135-201ENSMUST00000158752 108 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 Gm24739-201ENSMUST00000158855 292 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col18a1P39061 Gm22857-201ENSMUST00000174969 134 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col18a1P39061 Gm19637-201ENSMUST00000185933 579 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 Gm29105-201ENSMUST00000187256 450 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col18a1P39061 Trbv8-201ENSMUST00000194020 285 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col18a1P39061 Gm44468-201ENSMUST00000199516 105 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 Gm8745-201ENSMUST00000207846 782 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 Gm3690-201ENSMUST00000211341 262 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC5.7□□□□□ -1.5
Col18a1P39061 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Col18a1P39061 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Col18a1P39061 AC102369.2-201ENSMUST00000219725 1679 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Col18a1P39061 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col18a1P39061 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col18a1P39061 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Col18a1P39061 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Col18a1P39061 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC5.7□□□□□ -1.5
Col18a1P39061 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col18a1P39061 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col18a1P39061 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Col18a1P39061 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col18a1P39061 Gm24584-201ENSMUST00000157972 107 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 Gm22156-201ENSMUST00000158409 141 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col18a1P39061 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC5.7□□□□□ -1.5
Col18a1P39061 Gm22286-201ENSMUST00000179708 107 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 122.5 ms