Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trappc6aQ78XR0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.21■□□□□ 0.35
Trappc6aQ78XR0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trappc6aQ78XR0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trappc6aQ78XR0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trappc6aQ78XR0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trappc6aQ78XR0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trappc6aQ78XR0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trappc6aQ78XR0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trappc6aQ78XR0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trappc6aQ78XR0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trappc6aQ78XR0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trappc6aQ78XR0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trappc6aQ78XR0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Trappc6aQ78XR0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Trappc6aQ78XR0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trappc6aQ78XR0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trappc6aQ78XR0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trappc6aQ78XR0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.2■□□□□ 0.34
Trappc6aQ78XR0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trappc6aQ78XR0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trappc6aQ78XR0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trappc6aQ78XR0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trappc6aQ78XR0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.2■□□□□ 0.34
Trappc6aQ78XR0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trappc6aQ78XR0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trappc6aQ78XR0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trappc6aQ78XR0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trappc6aQ78XR0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trappc6aQ78XR0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trappc6aQ78XR0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trappc6aQ78XR0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trappc6aQ78XR0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.2■□□□□ 0.34
Trappc6aQ78XR0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trappc6aQ78XR0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trappc6aQ78XR0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trappc6aQ78XR0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.19■□□□□ 0.34
Trappc6aQ78XR0 Gm28033-201ENSMUST00000184224 96 ntBASIC17.19■□□□□ 0.34
Trappc6aQ78XR0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trappc6aQ78XR0 Gm7461-201ENSMUST00000058918 827 ntBASIC17.19■□□□□ 0.34
Trappc6aQ78XR0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trappc6aQ78XR0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trappc6aQ78XR0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trappc6aQ78XR0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trappc6aQ78XR0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trappc6aQ78XR0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trappc6aQ78XR0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trappc6aQ78XR0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Trappc6aQ78XR0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trappc6aQ78XR0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trappc6aQ78XR0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trappc6aQ78XR0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trappc6aQ78XR0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trappc6aQ78XR0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trappc6aQ78XR0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trappc6aQ78XR0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trappc6aQ78XR0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trappc6aQ78XR0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.18■□□□□ 0.34
Trappc6aQ78XR0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.18■□□□□ 0.34
Trappc6aQ78XR0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.18■□□□□ 0.34
Trappc6aQ78XR0 Gm26039-201ENSMUST00000158152 144 ntBASIC17.18■□□□□ 0.34
Trappc6aQ78XR0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trappc6aQ78XR0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trappc6aQ78XR0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trappc6aQ78XR0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trappc6aQ78XR0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.18■□□□□ 0.34
Trappc6aQ78XR0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trappc6aQ78XR0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trappc6aQ78XR0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Trappc6aQ78XR0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trappc6aQ78XR0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trappc6aQ78XR0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trappc6aQ78XR0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trappc6aQ78XR0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trappc6aQ78XR0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trappc6aQ78XR0 Fst-202ENSMUST00000223640 2612 ntBASIC17.17■□□□□ 0.34
Trappc6aQ78XR0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trappc6aQ78XR0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trappc6aQ78XR0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trappc6aQ78XR0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trappc6aQ78XR0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trappc6aQ78XR0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trappc6aQ78XR0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.17■□□□□ 0.34
Trappc6aQ78XR0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trappc6aQ78XR0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Trappc6aQ78XR0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.17■□□□□ 0.34
Trappc6aQ78XR0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trappc6aQ78XR0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trappc6aQ78XR0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trappc6aQ78XR0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Trappc6aQ78XR0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trappc6aQ78XR0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trappc6aQ78XR0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trappc6aQ78XR0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trappc6aQ78XR0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trappc6aQ78XR0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trappc6aQ78XR0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trappc6aQ78XR0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trappc6aQ78XR0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trappc6aQ78XR0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms