Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.43■□□□□ 0.54
Trim43aQ3TL54 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim43aQ3TL54 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim43aQ3TL54 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim43aQ3TL54 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim43aQ3TL54 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trim43aQ3TL54 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim43aQ3TL54 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.43■□□□□ 0.54
Trim43aQ3TL54 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.43■□□□□ 0.54
Trim43aQ3TL54 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trim43aQ3TL54 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim43aQ3TL54 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim43aQ3TL54 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim43aQ3TL54 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim43aQ3TL54 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim43aQ3TL54 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim43aQ3TL54 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.43■□□□□ 0.54
Trim43aQ3TL54 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.43■□□□□ 0.54
Trim43aQ3TL54 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim43aQ3TL54 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trim43aQ3TL54 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43aQ3TL54 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43aQ3TL54 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43aQ3TL54 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43aQ3TL54 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43aQ3TL54 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43aQ3TL54 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43aQ3TL54 Gm10418-201ENSMUST00000100943 576 ntBASIC18.42■□□□□ 0.54
Trim43aQ3TL54 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trim43aQ3TL54 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43aQ3TL54 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43aQ3TL54 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.42■□□□□ 0.54
Trim43aQ3TL54 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43aQ3TL54 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43aQ3TL54 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43aQ3TL54 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43aQ3TL54 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43aQ3TL54 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43aQ3TL54 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43aQ3TL54 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43aQ3TL54 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43aQ3TL54 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43aQ3TL54 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43aQ3TL54 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43aQ3TL54 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43aQ3TL54 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trim43aQ3TL54 Gm13216-201ENSMUST00000117145 591 ntBASIC18.41■□□□□ 0.54
Trim43aQ3TL54 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43aQ3TL54 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43aQ3TL54 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43aQ3TL54 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.41■□□□□ 0.54
Trim43aQ3TL54 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trim43aQ3TL54 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.41■□□□□ 0.54
Trim43aQ3TL54 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trim43aQ3TL54 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43aQ3TL54 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43aQ3TL54 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim43aQ3TL54 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim43aQ3TL54 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.4■□□□□ 0.54
Trim43aQ3TL54 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim43aQ3TL54 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim43aQ3TL54 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim43aQ3TL54 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.4■□□□□ 0.54
Trim43aQ3TL54 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trim43aQ3TL54 Mir5133-201ENSMUST00000174955 77 ntBASIC18.4■□□□□ 0.54
Trim43aQ3TL54 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.4■□□□□ 0.54
Trim43aQ3TL54 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.4■□□□□ 0.54
Trim43aQ3TL54 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trim43aQ3TL54 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim43aQ3TL54 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim43aQ3TL54 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim43aQ3TL54 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim43aQ3TL54 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim43aQ3TL54 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim43aQ3TL54 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim43aQ3TL54 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim43aQ3TL54 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim43aQ3TL54 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim43aQ3TL54 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim43aQ3TL54 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim43aQ3TL54 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.39■□□□□ 0.53
Trim43aQ3TL54 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.39■□□□□ 0.53
Trim43aQ3TL54 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.39■□□□□ 0.53
Trim43aQ3TL54 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim43aQ3TL54 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.39■□□□□ 0.53
Trim43aQ3TL54 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.39■□□□□ 0.53
Trim43aQ3TL54 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.39■□□□□ 0.53
Trim43aQ3TL54 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim43aQ3TL54 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trim43aQ3TL54 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Trim43aQ3TL54 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trim43aQ3TL54 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim43aQ3TL54 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim43aQ3TL54 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim43aQ3TL54 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim43aQ3TL54 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.38■□□□□ 0.53
Trim43aQ3TL54 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.38■□□□□ 0.53
Trim43aQ3TL54 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trim43aQ3TL54 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim43aQ3TL54 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms