Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pfdn6Q03958 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.45■□□□□ 0.38
Pfdn6Q03958 Gm18666-201ENSMUST00000190039 958 ntBASIC17.45■□□□□ 0.38
Pfdn6Q03958 Gm20049-201ENSMUST00000219950 730 ntBASIC17.45■□□□□ 0.38
Pfdn6Q03958 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.45■□□□□ 0.38
Pfdn6Q03958 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.45■□□□□ 0.38
Pfdn6Q03958 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pfdn6Q03958 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pfdn6Q03958 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pfdn6Q03958 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.45■□□□□ 0.38
Pfdn6Q03958 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn6Q03958 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn6Q03958 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pfdn6Q03958 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn6Q03958 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn6Q03958 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn6Q03958 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn6Q03958 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Pfdn6Q03958 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn6Q03958 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn6Q03958 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn6Q03958 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn6Q03958 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.44■□□□□ 0.38
Pfdn6Q03958 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn6Q03958 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pfdn6Q03958 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pfdn6Q03958 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pfdn6Q03958 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pfdn6Q03958 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pfdn6Q03958 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.43■□□□□ 0.38
Pfdn6Q03958 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pfdn6Q03958 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pfdn6Q03958 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pfdn6Q03958 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.43■□□□□ 0.38
Pfdn6Q03958 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pfdn6Q03958 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn6Q03958 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn6Q03958 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn6Q03958 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn6Q03958 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn6Q03958 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn6Q03958 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn6Q03958 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn6Q03958 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn6Q03958 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pfdn6Q03958 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn6Q03958 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Pfdn6Q03958 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn6Q03958 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Pfdn6Q03958 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn6Q03958 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn6Q03958 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pfdn6Q03958 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.42■□□□□ 0.38
Pfdn6Q03958 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn6Q03958 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn6Q03958 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.42■□□□□ 0.38
Pfdn6Q03958 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pfdn6Q03958 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pfdn6Q03958 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pfdn6Q03958 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Pfdn6Q03958 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.41■□□□□ 0.38
Pfdn6Q03958 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pfdn6Q03958 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pfdn6Q03958 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pfdn6Q03958 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pfdn6Q03958 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pfdn6Q03958 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pfdn6Q03958 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pfdn6Q03958 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pfdn6Q03958 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pfdn6Q03958 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pfdn6Q03958 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pfdn6Q03958 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pfdn6Q03958 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pfdn6Q03958 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pfdn6Q03958 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.4■□□□□ 0.38
Pfdn6Q03958 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pfdn6Q03958 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pfdn6Q03958 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pfdn6Q03958 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.4■□□□□ 0.38
Pfdn6Q03958 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pfdn6Q03958 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.4■□□□□ 0.38
Pfdn6Q03958 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.4■□□□□ 0.38
Pfdn6Q03958 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pfdn6Q03958 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pfdn6Q03958 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pfdn6Q03958 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pfdn6Q03958 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pfdn6Q03958 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.39■□□□□ 0.38
Pfdn6Q03958 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Pfdn6Q03958 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pfdn6Q03958 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
Pfdn6Q03958 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pfdn6Q03958 Mir8112-201ENSMUST00000184382 131 ntBASIC17.39■□□□□ 0.37
Pfdn6Q03958 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pfdn6Q03958 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pfdn6Q03958 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Pfdn6Q03958 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pfdn6Q03958 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pfdn6Q03958 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms