Protein–RNA interactions for Protein: P0C2J0

TY1B-PR2, Transposon Ty1-PR2 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,756 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR2P0C2J0 tT(UGU)Q1tT(UGU)Q1 76 nt-0.68□□□□□ -2.52
TY1B-PR2P0C2J0 YOL106WYOL106W 354 nt-0.68□□□□□ -2.52
TY1B-PR2P0C2J0 PTP2YOR208W 2253 nt-0.68□□□□□ -2.52
TY1B-PR2P0C2J0 YCR024C-BYCR024C-B 267 nt-0.68□□□□□ -2.52
TY1B-PR2P0C2J0 YKL023C-AYKL023C-A 228 nt-0.68□□□□□ -2.52
TY1B-PR2P0C2J0 SEM1YDR363W-A 270 nt-0.69□□□□□ -2.52
TY1B-PR2P0C2J0 RMD6YEL072W 696 nt-0.69□□□□□ -2.52
TY1B-PR2P0C2J0 PBI2YNL015W 228 nt-0.69□□□□□ -2.52
TY1B-PR2P0C2J0 YNL067W-BYNL067W-B 141 nt-0.69□□□□□ -2.52
TY1B-PR2P0C2J0 TIM13YGR181W 318 nt-0.7□□□□□ -2.52
TY1B-PR2P0C2J0 SDS22YKL193C 1017 nt-0.7□□□□□ -2.52
TY1B-PR2P0C2J0 PAA1YDR071C 576 nt-0.7□□□□□ -2.52
TY1B-PR2P0C2J0 YGL258W-AYGL258W-A 234 nt-0.7□□□□□ -2.52
TY1B-PR2P0C2J0 GPX1YKL026C 504 nt-0.71□□□□□ -2.52
TY1B-PR2P0C2J0 YBL008W-AYBL008W-A 240 nt-0.71□□□□□ -2.52
TY1B-PR2P0C2J0 COY1YKL179C 2040 nt-0.71□□□□□ -2.52
TY1B-PR2P0C2J0 YAP6YDR259C 1152 nt-0.72□□□□□ -2.52
TY1B-PR2P0C2J0 YOR248WYOR248W 303 nt-0.72□□□□□ -2.52
TY1B-PR2P0C2J0 DIE2YGR227W 1578 nt-0.73□□□□□ -2.53
TY1B-PR2P0C2J0 YER188C-AYER188C-A 300 nt-0.73□□□□□ -2.53
TY1B-PR2P0C2J0 DCP1YOL149W 696 nt-0.73□□□□□ -2.53
TY1B-PR2P0C2J0 YCR022CYCR022C 345 nt-0.75□□□□□ -2.53
TY1B-PR2P0C2J0 YNL067W-AYNL067W-A 147 nt-0.75□□□□□ -2.53
TY1B-PR2P0C2J0 YFR012W-AYFR012W-A 87 nt-0.75□□□□□ -2.53
TY1B-PR2P0C2J0 YHR054CYHR054C 1065 nt-0.75□□□□□ -2.53
TY1B-PR2P0C2J0 BLS1YLR408C 369 nt-0.75□□□□□ -2.53
TY1B-PR2P0C2J0 COX7YMR256C 183 nt-0.75□□□□□ -2.53
TY1B-PR2P0C2J0 YPL119C-AYPL119C-A 264 nt-0.75□□□□□ -2.53
TY1B-PR2P0C2J0 QCR7YDR529C 384 nt-0.76□□□□□ -2.53
TY1B-PR2P0C2J0 GRX5YPL059W 453 nt-0.76□□□□□ -2.53
TY1B-PR2P0C2J0 SNU56YDR240C 1479 nt-0.76□□□□□ -2.53
TY1B-PR2P0C2J0 YER076W-AYER076W-A 348 nt-0.77□□□□□ -2.53
TY1B-PR2P0C2J0 MRPS8YMR158W 468 nt-0.77□□□□□ -2.53
TY1B-PR2P0C2J0 YLL006W-AYLL006W-A 177 nt-0.78□□□□□ -2.53
TY1B-PR2P0C2J0 PSF2YJL072C 642 nt-0.78□□□□□ -2.53
TY1B-PR2P0C2J0 ATC1YDR184C 885 nt-0.79□□□□□ -2.54
TY1B-PR2P0C2J0 YHL046W-AYHL046W-A 327 nt-0.79□□□□□ -2.54
TY1B-PR2P0C2J0 LRP1YHR081W 555 nt-0.79□□□□□ -2.54
TY1B-PR2P0C2J0 YMR304C-AYMR304C-A 351 nt-0.79□□□□□ -2.54
TY1B-PR2P0C2J0 snR36snR36 182 nt-0.79□□□□□ -2.54
TY1B-PR2P0C2J0 ECL1YGR146C 636 nt-0.8□□□□□ -2.54
TY1B-PR2P0C2J0 YOR020W-AYOR020W-A 273 nt-0.8□□□□□ -2.54
TY1B-PR2P0C2J0 YDR269CYDR269C 324 nt-0.81□□□□□ -2.54
TY1B-PR2P0C2J0 YGR115CYGR115C 780 nt-0.81□□□□□ -2.54
TY1B-PR2P0C2J0 YHR138CYHR138C 345 nt-0.81□□□□□ -2.54
TY1B-PR2P0C2J0 YMR075C-AYMR075C-A 366 nt-0.81□□□□□ -2.54
TY1B-PR2P0C2J0 YNL319WYNL319W 441 nt-0.83□□□□□ -2.54
TY1B-PR2P0C2J0 IPP1YBR011C 864 nt-0.83□□□□□ -2.54
TY1B-PR2P0C2J0 SPO21YOL091W 1830 nt-0.83□□□□□ -2.54
TY1B-PR2P0C2J0 ACF4YJR083C 930 nt-0.83□□□□□ -2.54
TY1B-PR2P0C2J0 YIL071W-AYIL071W-A 477 nt-0.84□□□□□ -2.54
TY1B-PR2P0C2J0 YLR171WYLR171W 390 nt-0.84□□□□□ -2.54
TY1B-PR2P0C2J0 YMR307C-AYMR307C-A 195 nt-0.84□□□□□ -2.54
TY1B-PR2P0C2J0 YPR096CYPR096C 303 nt-0.84□□□□□ -2.54
TY1B-PR2P0C2J0 COG6YNL041C 2520 nt-0.84□□□□□ -2.54
TY1B-PR2P0C2J0 tA(UGC)QtA(UGC)Q 76 nt-0.85□□□□□ -2.55
TY1B-PR2P0C2J0 YER138W-AYER138W-A 105 nt-0.85□□□□□ -2.55
TY1B-PR2P0C2J0 YKL111CYKL111C 336 nt-0.85□□□□□ -2.55
TY1B-PR2P0C2J0 YPL261CYPL261C 309 nt-0.85□□□□□ -2.55
TY1B-PR2P0C2J0 CWC23YGL128C 852 nt-0.85□□□□□ -2.55
TY1B-PR2P0C2J0 IRC16YPR038W 360 nt-0.85□□□□□ -2.55
TY1B-PR2P0C2J0 YHR131W-AYHR131W-A 246 nt-0.86□□□□□ -2.55
TY1B-PR2P0C2J0 SPC24YMR117C 642 nt-0.87□□□□□ -2.55
TY1B-PR2P0C2J0 YOR345CYOR345C 351 nt-0.87□□□□□ -2.55
TY1B-PR2P0C2J0 YHR050W-AYHR050W-A 171 nt-0.88□□□□□ -2.55
TY1B-PR2P0C2J0 YIR044CYIR044C 186 nt-0.88□□□□□ -2.55
TY1B-PR2P0C2J0 YKL202WYKL202W 582 nt-0.88□□□□□ -2.55
TY1B-PR2P0C2J0 VAM3YOR106W 852 nt-0.88□□□□□ -2.55
TY1B-PR2P0C2J0 RRI2YOL117W 1938 nt-0.88□□□□□ -2.55
TY1B-PR2P0C2J0 YLR198CYLR198C 360 nt-0.88□□□□□ -2.55
TY1B-PR2P0C2J0 RPS30AYLR287C-A 192 nt-0.88□□□□□ -2.55
TY1B-PR2P0C2J0 RPS25BYLR333C 327 nt-0.88□□□□□ -2.55
TY1B-PR2P0C2J0 YLR163W-AYLR163W-A 114 nt-0.89□□□□□ -2.55
TY1B-PR2P0C2J0 LOC1YFR001W 615 nt-0.9□□□□□ -2.55
TY1B-PR2P0C2J0 ILM1YJR118C 612 nt-0.9□□□□□ -2.55
TY1B-PR2P0C2J0 YKL068W-AYKL068W-A 237 nt-0.9□□□□□ -2.55
TY1B-PR2P0C2J0 YOR011W-AYOR011W-A 207 nt-0.9□□□□□ -2.55
TY1B-PR2P0C2J0 POL32YJR043C 1053 nt-0.91□□□□□ -2.55
TY1B-PR2P0C2J0 YLR287CYLR287C 1068 nt-0.91□□□□□ -2.55
TY1B-PR2P0C2J0 YML108WYML108W 318 nt-0.91□□□□□ -2.56
TY1B-PR2P0C2J0 RPS20YHL015W 366 nt-0.92□□□□□ -2.56
TY1B-PR2P0C2J0 YOR366WYOR366W 354 nt-0.92□□□□□ -2.56
TY1B-PR2P0C2J0 SRB7YDR308C 423 nt-0.93□□□□□ -2.56
TY1B-PR2P0C2J0 YNL146C-AYNL146C-A 195 nt-0.93□□□□□ -2.56
TY1B-PR2P0C2J0 YOR364WYOR364W 369 nt-0.93□□□□□ -2.56
TY1B-PR2P0C2J0 snR51snR51 107 nt-0.95□□□□□ -2.56
TY1B-PR2P0C2J0 tN(GUU)QtN(GUU)Q 71 nt-0.96□□□□□ -2.56
TY1B-PR2P0C2J0 ATG31YDR022C 591 nt-0.96□□□□□ -2.56
TY1B-PR2P0C2J0 snR161snR161 161 nt-0.96□□□□□ -2.56
TY1B-PR2P0C2J0 PCF11YDR228C 1881 nt-0.97□□□□□ -2.56
TY1B-PR2P0C2J0 YGL239CYGL239C 315 nt-0.97□□□□□ -2.56
TY1B-PR2P0C2J0 YBR099CYBR099C 384 nt-0.97□□□□□ -2.56
TY1B-PR2P0C2J0 BUD26YDR241W 288 nt-0.98□□□□□ -2.57
TY1B-PR2P0C2J0 YCR018C-AYCR018C-A 255 nt-0.98□□□□□ -2.57
TY1B-PR2P0C2J0 YGR228WYGR228W 345 nt-0.98□□□□□ -2.57
TY1B-PR2P0C2J0 YHL041WYHL041W 450 nt-0.98□□□□□ -2.57
TY1B-PR2P0C2J0 YOL029CYOL029C 606 nt-0.98□□□□□ -2.57
TY1B-PR2P0C2J0 YER079WYER079W 633 nt-0.99□□□□□ -2.57
TY1B-PR2P0C2J0 PAU9YBL108C-A 129 nt-0.99□□□□□ -2.57
TY1B-PR2P0C2J0 YDL185C-AYDL185C-A 228 nt-1□□□□□ -2.57
Retrieved 100 of 7,029 protein–RNA pairs in 41.3 ms