Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Pfdn6Q03958 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Pfdn6Q03958 Mir2861-201ENSMUST00000175539 82 ntBASIC17.51■□□□□ 0.39
Pfdn6Q03958 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pfdn6Q03958 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pfdn6Q03958 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pfdn6Q03958 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pfdn6Q03958 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pfdn6Q03958 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pfdn6Q03958 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pfdn6Q03958 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.51■□□□□ 0.39
Pfdn6Q03958 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pfdn6Q03958 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pfdn6Q03958 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.51■□□□□ 0.39
Pfdn6Q03958 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.5■□□□□ 0.39
Pfdn6Q03958 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pfdn6Q03958 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Pfdn6Q03958 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Pfdn6Q03958 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.5■□□□□ 0.39
Pfdn6Q03958 Gm11643-201ENSMUST00000119578 864 ntBASIC17.5■□□□□ 0.39
Pfdn6Q03958 Gm13158-201ENSMUST00000122007 736 ntBASIC17.5■□□□□ 0.39
Pfdn6Q03958 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.5■□□□□ 0.39
Pfdn6Q03958 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pfdn6Q03958 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pfdn6Q03958 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Pfdn6Q03958 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.5■□□□□ 0.39
Pfdn6Q03958 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pfdn6Q03958 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.49■□□□□ 0.39
Pfdn6Q03958 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.49■□□□□ 0.39
Pfdn6Q03958 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pfdn6Q03958 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pfdn6Q03958 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pfdn6Q03958 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pfdn6Q03958 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pfdn6Q03958 Gm15375-201ENSMUST00000119510 849 ntBASIC17.49■□□□□ 0.39
Pfdn6Q03958 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.49■□□□□ 0.39
Pfdn6Q03958 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.49■□□□□ 0.39
Pfdn6Q03958 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pfdn6Q03958 Mtag2-201ENSMUST00000058665 714 ntBASIC17.49■□□□□ 0.39
Pfdn6Q03958 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pfdn6Q03958 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pfdn6Q03958 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pfdn6Q03958 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pfdn6Q03958 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pfdn6Q03958 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pfdn6Q03958 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Pfdn6Q03958 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pfdn6Q03958 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pfdn6Q03958 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Pfdn6Q03958 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pfdn6Q03958 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pfdn6Q03958 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pfdn6Q03958 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pfdn6Q03958 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pfdn6Q03958 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pfdn6Q03958 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pfdn6Q03958 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pfdn6Q03958 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pfdn6Q03958 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
Pfdn6Q03958 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pfdn6Q03958 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pfdn6Q03958 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pfdn6Q03958 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.47■□□□□ 0.39
Pfdn6Q03958 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.47■□□□□ 0.39
Pfdn6Q03958 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pfdn6Q03958 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pfdn6Q03958 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pfdn6Q03958 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pfdn6Q03958 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pfdn6Q03958 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pfdn6Q03958 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pfdn6Q03958 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pfdn6Q03958 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Pfdn6Q03958 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.46■□□□□ 0.39
Pfdn6Q03958 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pfdn6Q03958 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pfdn6Q03958 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pfdn6Q03958 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pfdn6Q03958 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pfdn6Q03958 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pfdn6Q03958 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.46■□□□□ 0.39
Pfdn6Q03958 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.46■□□□□ 0.39
Pfdn6Q03958 Gm11249-201ENSMUST00000117071 859 ntBASIC17.46■□□□□ 0.39
Pfdn6Q03958 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pfdn6Q03958 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pfdn6Q03958 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pfdn6Q03958 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pfdn6Q03958 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pfdn6Q03958 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pfdn6Q03958 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pfdn6Q03958 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pfdn6Q03958 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Pfdn6Q03958 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pfdn6Q03958 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pfdn6Q03958 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pfdn6Q03958 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
Pfdn6Q03958 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pfdn6Q03958 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Pfdn6Q03958 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pfdn6Q03958 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms