Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1aP25118 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1aP25118 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1aP25118 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1aP25118 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1aP25118 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Gm11927-201ENSMUST00000118472 759 ntBASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Gm4968-201ENSMUST00000071458 858 ntBASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf1aP25118 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.6□□□□□ -0.07
Tnfrsf1aP25118 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf1aP25118 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf1aP25118 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf1aP25118 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf1aP25118 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf1aP25118 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf1aP25118 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf1aP25118 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf1aP25118 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Tnfrsf1aP25118 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf1aP25118 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf1aP25118 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf1aP25118 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Tnfrsf1aP25118 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf1aP25118 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf1aP25118 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.6□□□□□ -0.07
Tnfrsf1aP25118 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf1aP25118 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf1aP25118 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf1aP25118 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf1aP25118 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf1aP25118 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf1aP25118 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf1aP25118 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf1aP25118 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf1aP25118 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf1aP25118 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf1aP25118 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf1aP25118 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.59□□□□□ -0.07
Tnfrsf1aP25118 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf1aP25118 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf1aP25118 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf1aP25118 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf1aP25118 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf1aP25118 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf1aP25118 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf1aP25118 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.59□□□□□ -0.07
Tnfrsf1aP25118 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.59□□□□□ -0.07
Tnfrsf1aP25118 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf1aP25118 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf1aP25118 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf1aP25118 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf1aP25118 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf1aP25118 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf1aP25118 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf1aP25118 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf1aP25118 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Tnfrsf1aP25118 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.58□□□□□ -0.07
Tnfrsf1aP25118 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Tnfrsf1aP25118 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Tnfrsf1aP25118 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Tnfrsf1aP25118 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Tnfrsf1aP25118 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Tnfrsf1aP25118 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.58□□□□□ -0.07
Tnfrsf1aP25118 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Tnfrsf1aP25118 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Tnfrsf1aP25118 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Tnfrsf1aP25118 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Tnfrsf1aP25118 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfrsf1aP25118 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfrsf1aP25118 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfrsf1aP25118 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms