Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lrif1Q8CDD9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrif1Q8CDD9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrif1Q8CDD9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrif1Q8CDD9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrif1Q8CDD9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrif1Q8CDD9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Lrif1Q8CDD9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Lrif1Q8CDD9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrif1Q8CDD9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Lrif1Q8CDD9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrif1Q8CDD9 Dancr-204ENSMUST00000132389 2347 ntBASIC17.27■□□□□ 0.36
Lrif1Q8CDD9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lrif1Q8CDD9 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.27■□□□□ 0.36
Lrif1Q8CDD9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrif1Q8CDD9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.27■□□□□ 0.36
Lrif1Q8CDD9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrif1Q8CDD9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrif1Q8CDD9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lrif1Q8CDD9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrif1Q8CDD9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrif1Q8CDD9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrif1Q8CDD9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lrif1Q8CDD9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.27■□□□□ 0.36
Lrif1Q8CDD9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.27■□□□□ 0.36
Lrif1Q8CDD9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrif1Q8CDD9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Lrif1Q8CDD9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Lrif1Q8CDD9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrif1Q8CDD9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Lrif1Q8CDD9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lrif1Q8CDD9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lrif1Q8CDD9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.27■□□□□ 0.35
Lrif1Q8CDD9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lrif1Q8CDD9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lrif1Q8CDD9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Lrif1Q8CDD9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Lrif1Q8CDD9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrif1Q8CDD9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lrif1Q8CDD9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
Lrif1Q8CDD9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrif1Q8CDD9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrif1Q8CDD9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrif1Q8CDD9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Lrif1Q8CDD9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Lrif1Q8CDD9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Lrif1Q8CDD9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrif1Q8CDD9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.26■□□□□ 0.35
Lrif1Q8CDD9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Lrif1Q8CDD9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Lrif1Q8CDD9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrif1Q8CDD9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lrif1Q8CDD9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrif1Q8CDD9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lrif1Q8CDD9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Lrif1Q8CDD9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrif1Q8CDD9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrif1Q8CDD9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Lrif1Q8CDD9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lrif1Q8CDD9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lrif1Q8CDD9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Lrif1Q8CDD9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Lrif1Q8CDD9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.25■□□□□ 0.35
Lrif1Q8CDD9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.25■□□□□ 0.35
Lrif1Q8CDD9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrif1Q8CDD9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrif1Q8CDD9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Lrif1Q8CDD9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lrif1Q8CDD9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lrif1Q8CDD9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrif1Q8CDD9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrif1Q8CDD9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Lrif1Q8CDD9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrif1Q8CDD9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.24■□□□□ 0.35
Lrif1Q8CDD9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrif1Q8CDD9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrif1Q8CDD9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrif1Q8CDD9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrif1Q8CDD9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.24■□□□□ 0.35
Lrif1Q8CDD9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrif1Q8CDD9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.24■□□□□ 0.35
Lrif1Q8CDD9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrif1Q8CDD9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Lrif1Q8CDD9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrif1Q8CDD9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrif1Q8CDD9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Lrif1Q8CDD9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrif1Q8CDD9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrif1Q8CDD9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrif1Q8CDD9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrif1Q8CDD9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lrif1Q8CDD9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lrif1Q8CDD9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lrif1Q8CDD9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrif1Q8CDD9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrif1Q8CDD9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrif1Q8CDD9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lrif1Q8CDD9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrif1Q8CDD9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrif1Q8CDD9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms