Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43aQ3TL54 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43aQ3TL54 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43aQ3TL54 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43aQ3TL54 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43aQ3TL54 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.55■□□□□ 0.56
Trim43aQ3TL54 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim43aQ3TL54 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim43aQ3TL54 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Trim43aQ3TL54 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.55■□□□□ 0.56
Trim43aQ3TL54 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.55■□□□□ 0.56
Trim43aQ3TL54 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim43aQ3TL54 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim43aQ3TL54 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim43aQ3TL54 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.55■□□□□ 0.56
Trim43aQ3TL54 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trim43aQ3TL54 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43aQ3TL54 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43aQ3TL54 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43aQ3TL54 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43aQ3TL54 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43aQ3TL54 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43aQ3TL54 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43aQ3TL54 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.54■□□□□ 0.56
Trim43aQ3TL54 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43aQ3TL54 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43aQ3TL54 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43aQ3TL54 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43aQ3TL54 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trim43aQ3TL54 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43aQ3TL54 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43aQ3TL54 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trim43aQ3TL54 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Trim43aQ3TL54 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43aQ3TL54 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Trim43aQ3TL54 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43aQ3TL54 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trim43aQ3TL54 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43aQ3TL54 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43aQ3TL54 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.53■□□□□ 0.56
Trim43aQ3TL54 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trim43aQ3TL54 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43aQ3TL54 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43aQ3TL54 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.53■□□□□ 0.56
Trim43aQ3TL54 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43aQ3TL54 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.53■□□□□ 0.56
Trim43aQ3TL54 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43aQ3TL54 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43aQ3TL54 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.53■□□□□ 0.56
Trim43aQ3TL54 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim43aQ3TL54 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim43aQ3TL54 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim43aQ3TL54 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim43aQ3TL54 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim43aQ3TL54 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.52■□□□□ 0.56
Trim43aQ3TL54 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Trim43aQ3TL54 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim43aQ3TL54 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.52■□□□□ 0.56
Trim43aQ3TL54 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim43aQ3TL54 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Trim43aQ3TL54 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Trim43aQ3TL54 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim43aQ3TL54 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.52■□□□□ 0.55
Trim43aQ3TL54 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim43aQ3TL54 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trim43aQ3TL54 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim43aQ3TL54 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim43aQ3TL54 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim43aQ3TL54 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trim43aQ3TL54 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim43aQ3TL54 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim43aQ3TL54 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim43aQ3TL54 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim43aQ3TL54 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim43aQ3TL54 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.51■□□□□ 0.55
Trim43aQ3TL54 Gm29791-202ENSMUST00000207888 369 ntBASIC18.51■□□□□ 0.55
Trim43aQ3TL54 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.51■□□□□ 0.55
Trim43aQ3TL54 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trim43aQ3TL54 Gm10602-201ENSMUST00000098239 609 ntBASIC18.51■□□□□ 0.55
Trim43aQ3TL54 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim43aQ3TL54 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim43aQ3TL54 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim43aQ3TL54 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim43aQ3TL54 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim43aQ3TL54 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Trim43aQ3TL54 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim43aQ3TL54 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim43aQ3TL54 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim43aQ3TL54 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim43aQ3TL54 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim43aQ3TL54 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim43aQ3TL54 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim43aQ3TL54 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.5■□□□□ 0.55
Trim43aQ3TL54 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim43aQ3TL54 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim43aQ3TL54 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.5■□□□□ 0.55
Trim43aQ3TL54 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim43aQ3TL54 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim43aQ3TL54 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim43aQ3TL54 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms