Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Uspl1Q3ULM6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC22.68■■□□□ 1.22
Uspl1Q3ULM6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC22.68■■□□□ 1.22
Uspl1Q3ULM6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC22.68■■□□□ 1.22
Uspl1Q3ULM6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Uspl1Q3ULM6 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Uspl1Q3ULM6 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Uspl1Q3ULM6 Gm43808-201ENSMUST00000202534 2065 ntBASIC22.68■■□□□ 1.22
Uspl1Q3ULM6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Uspl1Q3ULM6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Uspl1Q3ULM6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC22.68■■□□□ 1.22
Uspl1Q3ULM6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Uspl1Q3ULM6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Uspl1Q3ULM6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Uspl1Q3ULM6 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Uspl1Q3ULM6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Uspl1Q3ULM6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Uspl1Q3ULM6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC22.67■■□□□ 1.22
Uspl1Q3ULM6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Uspl1Q3ULM6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Uspl1Q3ULM6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Uspl1Q3ULM6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC22.67■■□□□ 1.22
Uspl1Q3ULM6 Arhgef4-208ENSMUST00000211073 171 ntBASIC22.67■■□□□ 1.22
Uspl1Q3ULM6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Uspl1Q3ULM6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Uspl1Q3ULM6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC22.67■■□□□ 1.22
Uspl1Q3ULM6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Uspl1Q3ULM6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC22.67■■□□□ 1.22
Uspl1Q3ULM6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Uspl1Q3ULM6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Uspl1Q3ULM6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Uspl1Q3ULM6 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
Uspl1Q3ULM6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Uspl1Q3ULM6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Uspl1Q3ULM6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC22.66■■□□□ 1.22
Uspl1Q3ULM6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC22.66■■□□□ 1.22
Uspl1Q3ULM6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Uspl1Q3ULM6 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Uspl1Q3ULM6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Uspl1Q3ULM6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Uspl1Q3ULM6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Uspl1Q3ULM6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Uspl1Q3ULM6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Uspl1Q3ULM6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
Uspl1Q3ULM6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Uspl1Q3ULM6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Uspl1Q3ULM6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Uspl1Q3ULM6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC22.65■■□□□ 1.22
Uspl1Q3ULM6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Uspl1Q3ULM6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC22.65■■□□□ 1.22
Uspl1Q3ULM6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Uspl1Q3ULM6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC22.65■■□□□ 1.22
Uspl1Q3ULM6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Uspl1Q3ULM6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Uspl1Q3ULM6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Uspl1Q3ULM6 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC22.65■■□□□ 1.22
Uspl1Q3ULM6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Uspl1Q3ULM6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Uspl1Q3ULM6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Uspl1Q3ULM6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Uspl1Q3ULM6 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Uspl1Q3ULM6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Uspl1Q3ULM6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Uspl1Q3ULM6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Uspl1Q3ULM6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Uspl1Q3ULM6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Uspl1Q3ULM6 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC22.63■■□□□ 1.21
Uspl1Q3ULM6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Uspl1Q3ULM6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC22.63■■□□□ 1.21
Uspl1Q3ULM6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Uspl1Q3ULM6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Uspl1Q3ULM6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Uspl1Q3ULM6 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Uspl1Q3ULM6 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Uspl1Q3ULM6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Uspl1Q3ULM6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Uspl1Q3ULM6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Uspl1Q3ULM6 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
Uspl1Q3ULM6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC22.62■■□□□ 1.21
Uspl1Q3ULM6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Uspl1Q3ULM6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Uspl1Q3ULM6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Uspl1Q3ULM6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Uspl1Q3ULM6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Uspl1Q3ULM6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Uspl1Q3ULM6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Uspl1Q3ULM6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Uspl1Q3ULM6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
Uspl1Q3ULM6 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Uspl1Q3ULM6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Uspl1Q3ULM6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Uspl1Q3ULM6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Uspl1Q3ULM6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Uspl1Q3ULM6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Uspl1Q3ULM6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Uspl1Q3ULM6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Uspl1Q3ULM6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Uspl1Q3ULM6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Uspl1Q3ULM6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Uspl1Q3ULM6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 130.2 ms