Protein–RNA interactions for Protein: J3QQ59

Gm3383, Predicted gene 3194, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3383J3QQ59 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm3383J3QQ59 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3383J3QQ59 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3383J3QQ59 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3383J3QQ59 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3383J3QQ59 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3383J3QQ59 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3383J3QQ59 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Gm3383J3QQ59 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.91■□□□□ 0.62
Gm3383J3QQ59 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3383J3QQ59 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3383J3QQ59 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3383J3QQ59 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3383J3QQ59 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3383J3QQ59 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Gm3383J3QQ59 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3383J3QQ59 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Gm3383J3QQ59 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3383J3QQ59 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Gm3383J3QQ59 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3383J3QQ59 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3383J3QQ59 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3383J3QQ59 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Gm3383J3QQ59 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3383J3QQ59 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3383J3QQ59 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3383J3QQ59 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3383J3QQ59 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Gm3383J3QQ59 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3383J3QQ59 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3383J3QQ59 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3383J3QQ59 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.9■□□□□ 0.62
Gm3383J3QQ59 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Gm3383J3QQ59 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3383J3QQ59 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Gm3383J3QQ59 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Gm3383J3QQ59 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3383J3QQ59 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3383J3QQ59 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3383J3QQ59 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Gm3383J3QQ59 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3383J3QQ59 Gm28033-201ENSMUST00000184224 96 ntBASIC18.89■□□□□ 0.61
Gm3383J3QQ59 Gm18669-201ENSMUST00000216049 778 ntBASIC18.89■□□□□ 0.61
Gm3383J3QQ59 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3383J3QQ59 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3383J3QQ59 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3383J3QQ59 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Gm3383J3QQ59 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3383J3QQ59 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3383J3QQ59 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3383J3QQ59 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3383J3QQ59 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3383J3QQ59 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.88■□□□□ 0.61
Gm3383J3QQ59 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3383J3QQ59 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3383J3QQ59 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3383J3QQ59 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Gm3383J3QQ59 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Gm3383J3QQ59 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3383J3QQ59 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3383J3QQ59 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3383J3QQ59 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3383J3QQ59 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3383J3QQ59 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3383J3QQ59 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.88■□□□□ 0.61
Gm3383J3QQ59 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3383J3QQ59 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3383J3QQ59 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3383J3QQ59 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3383J3QQ59 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3383J3QQ59 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.87■□□□□ 0.61
Gm3383J3QQ59 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3383J3QQ59 Gm26039-201ENSMUST00000158152 144 ntBASIC18.87■□□□□ 0.61
Gm3383J3QQ59 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3383J3QQ59 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3383J3QQ59 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3383J3QQ59 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3383J3QQ59 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3383J3QQ59 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Gm3383J3QQ59 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3383J3QQ59 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3383J3QQ59 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3383J3QQ59 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Gm3383J3QQ59 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3383J3QQ59 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3383J3QQ59 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3383J3QQ59 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Gm3383J3QQ59 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3383J3QQ59 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3383J3QQ59 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3383J3QQ59 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3383J3QQ59 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3383J3QQ59 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3383J3QQ59 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3383J3QQ59 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3383J3QQ59 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3383J3QQ59 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3383J3QQ59 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.86■□□□□ 0.61
Gm3383J3QQ59 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3383J3QQ59 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms