Protein–RNA interactions for Protein: Q9Z2Q2

Knop1, Lysine-rich nucleolar protein 1, mousemouse

Known RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Knop1Q9Z2Q2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Knop1Q9Z2Q2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Knop1Q9Z2Q2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Knop1Q9Z2Q2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Knop1Q9Z2Q2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.47■□□□□ 0.71
Knop1Q9Z2Q2 Gm26524-201ENSMUST00000192339 390 ntBASIC19.47■□□□□ 0.71
Knop1Q9Z2Q2 Rab3c-203ENSMUST00000224180 967 ntBASIC19.47■□□□□ 0.71
Knop1Q9Z2Q2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Knop1Q9Z2Q2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Knop1Q9Z2Q2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Knop1Q9Z2Q2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Knop1Q9Z2Q2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Knop1Q9Z2Q2 Flg-201ENSMUST00000050758 1488 ntBASIC19.47■□□□□ 0.71
Knop1Q9Z2Q2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Knop1Q9Z2Q2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Knop1Q9Z2Q2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Knop1Q9Z2Q2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.46■□□□□ 0.71
Knop1Q9Z2Q2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Knop1Q9Z2Q2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.46■□□□□ 0.71
Knop1Q9Z2Q2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.46■□□□□ 0.71
Knop1Q9Z2Q2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Knop1Q9Z2Q2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Knop1Q9Z2Q2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Knop1Q9Z2Q2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Knop1Q9Z2Q2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Knop1Q9Z2Q2 Zfp783-201ENSMUST00000095946 670 ntBASIC19.46■□□□□ 0.71
Knop1Q9Z2Q2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Knop1Q9Z2Q2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Knop1Q9Z2Q2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.46■□□□□ 0.71
Knop1Q9Z2Q2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Knop1Q9Z2Q2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Knop1Q9Z2Q2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Knop1Q9Z2Q2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.45■□□□□ 0.7
Knop1Q9Z2Q2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Knop1Q9Z2Q2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Knop1Q9Z2Q2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.45■□□□□ 0.7
Knop1Q9Z2Q2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Knop1Q9Z2Q2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Knop1Q9Z2Q2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.45■□□□□ 0.7
Knop1Q9Z2Q2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.45■□□□□ 0.7
Knop1Q9Z2Q2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Knop1Q9Z2Q2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Knop1Q9Z2Q2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.45■□□□□ 0.7
Knop1Q9Z2Q2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Knop1Q9Z2Q2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Knop1Q9Z2Q2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Knop1Q9Z2Q2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Knop1Q9Z2Q2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Knop1Q9Z2Q2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Knop1Q9Z2Q2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Knop1Q9Z2Q2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Knop1Q9Z2Q2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Knop1Q9Z2Q2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.44■□□□□ 0.7
Knop1Q9Z2Q2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Knop1Q9Z2Q2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Knop1Q9Z2Q2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Knop1Q9Z2Q2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Knop1Q9Z2Q2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Knop1Q9Z2Q2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Knop1Q9Z2Q2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Knop1Q9Z2Q2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Knop1Q9Z2Q2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Knop1Q9Z2Q2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Knop1Q9Z2Q2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Knop1Q9Z2Q2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Knop1Q9Z2Q2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Knop1Q9Z2Q2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Knop1Q9Z2Q2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Knop1Q9Z2Q2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Knop1Q9Z2Q2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Knop1Q9Z2Q2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Knop1Q9Z2Q2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Knop1Q9Z2Q2 Gm37179-201ENSMUST00000194862 823 ntBASIC19.43■□□□□ 0.7
Knop1Q9Z2Q2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Knop1Q9Z2Q2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Knop1Q9Z2Q2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Knop1Q9Z2Q2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Knop1Q9Z2Q2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Knop1Q9Z2Q2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Knop1Q9Z2Q2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Knop1Q9Z2Q2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Knop1Q9Z2Q2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.43■□□□□ 0.7
Knop1Q9Z2Q2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Knop1Q9Z2Q2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Knop1Q9Z2Q2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Knop1Q9Z2Q2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Knop1Q9Z2Q2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Knop1Q9Z2Q2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Knop1Q9Z2Q2 Gm12933-201ENSMUST00000120203 872 ntBASIC19.42■□□□□ 0.7
Knop1Q9Z2Q2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.42■□□□□ 0.7
Knop1Q9Z2Q2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Knop1Q9Z2Q2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Knop1Q9Z2Q2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Knop1Q9Z2Q2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Knop1Q9Z2Q2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Knop1Q9Z2Q2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Knop1Q9Z2Q2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Knop1Q9Z2Q2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Knop1Q9Z2Q2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Knop1Q9Z2Q2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms