Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hmgn5Q9JL35 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hmgn5Q9JL35 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Hmgn5Q9JL35 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hmgn5Q9JL35 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hmgn5Q9JL35 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.83■□□□□ 0.77
Hmgn5Q9JL35 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hmgn5Q9JL35 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hmgn5Q9JL35 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hmgn5Q9JL35 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.77
Hmgn5Q9JL35 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Hmgn5Q9JL35 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hmgn5Q9JL35 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.83■□□□□ 0.76
Hmgn5Q9JL35 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hmgn5Q9JL35 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hmgn5Q9JL35 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hmgn5Q9JL35 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hmgn5Q9JL35 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hmgn5Q9JL35 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hmgn5Q9JL35 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hmgn5Q9JL35 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hmgn5Q9JL35 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hmgn5Q9JL35 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hmgn5Q9JL35 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgn5Q9JL35 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgn5Q9JL35 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgn5Q9JL35 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Hmgn5Q9JL35 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgn5Q9JL35 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgn5Q9JL35 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.82■□□□□ 0.76
Hmgn5Q9JL35 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Hmgn5Q9JL35 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgn5Q9JL35 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Hmgn5Q9JL35 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgn5Q9JL35 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.82■□□□□ 0.76
Hmgn5Q9JL35 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgn5Q9JL35 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgn5Q9JL35 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Hmgn5Q9JL35 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgn5Q9JL35 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgn5Q9JL35 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Hmgn5Q9JL35 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgn5Q9JL35 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Hmgn5Q9JL35 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Hmgn5Q9JL35 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgn5Q9JL35 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.82■□□□□ 0.76
Hmgn5Q9JL35 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Hmgn5Q9JL35 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgn5Q9JL35 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.81■□□□□ 0.76
Hmgn5Q9JL35 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmgn5Q9JL35 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Hmgn5Q9JL35 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmgn5Q9JL35 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Hmgn5Q9JL35 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmgn5Q9JL35 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Hmgn5Q9JL35 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Hmgn5Q9JL35 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Hmgn5Q9JL35 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.81■□□□□ 0.76
Hmgn5Q9JL35 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmgn5Q9JL35 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.81■□□□□ 0.76
Hmgn5Q9JL35 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.81■□□□□ 0.76
Hmgn5Q9JL35 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmgn5Q9JL35 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmgn5Q9JL35 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmgn5Q9JL35 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.8■□□□□ 0.76
Hmgn5Q9JL35 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.8■□□□□ 0.76
Hmgn5Q9JL35 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgn5Q9JL35 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgn5Q9JL35 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgn5Q9JL35 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgn5Q9JL35 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Hmgn5Q9JL35 Gm13146-201ENSMUST00000118508 780 ntBASIC19.8■□□□□ 0.76
Hmgn5Q9JL35 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgn5Q9JL35 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgn5Q9JL35 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgn5Q9JL35 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.8■□□□□ 0.76
Hmgn5Q9JL35 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgn5Q9JL35 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Hmgn5Q9JL35 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgn5Q9JL35 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgn5Q9JL35 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgn5Q9JL35 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Hmgn5Q9JL35 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Hmgn5Q9JL35 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.79■□□□□ 0.76
Hmgn5Q9JL35 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Hmgn5Q9JL35 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgn5Q9JL35 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgn5Q9JL35 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgn5Q9JL35 Gm13534-201ENSMUST00000121169 513 ntBASIC19.79■□□□□ 0.76
Hmgn5Q9JL35 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgn5Q9JL35 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgn5Q9JL35 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Hmgn5Q9JL35 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.79■□□□□ 0.76
Hmgn5Q9JL35 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgn5Q9JL35 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgn5Q9JL35 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgn5Q9JL35 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.79■□□□□ 0.76
Hmgn5Q9JL35 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgn5Q9JL35 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Hmgn5Q9JL35 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms