Protein–RNA interactions for Protein: Q9R013

Ctsf, Cathepsin F, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtsfQ9R013 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CtsfQ9R013 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CtsfQ9R013 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.14■□□□□ 0.65
CtsfQ9R013 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CtsfQ9R013 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CtsfQ9R013 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CtsfQ9R013 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.14■□□□□ 0.65
CtsfQ9R013 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.14■□□□□ 0.65
CtsfQ9R013 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CtsfQ9R013 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.14■□□□□ 0.65
CtsfQ9R013 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CtsfQ9R013 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CtsfQ9R013 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CtsfQ9R013 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CtsfQ9R013 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CtsfQ9R013 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CtsfQ9R013 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CtsfQ9R013 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CtsfQ9R013 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CtsfQ9R013 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CtsfQ9R013 Mir2861-201ENSMUST00000175539 82 ntBASIC19.13■□□□□ 0.65
CtsfQ9R013 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CtsfQ9R013 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
CtsfQ9R013 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CtsfQ9R013 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CtsfQ9R013 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CtsfQ9R013 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CtsfQ9R013 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.13■□□□□ 0.65
CtsfQ9R013 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CtsfQ9R013 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.13■□□□□ 0.65
CtsfQ9R013 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CtsfQ9R013 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CtsfQ9R013 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CtsfQ9R013 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CtsfQ9R013 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CtsfQ9R013 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.12■□□□□ 0.65
CtsfQ9R013 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CtsfQ9R013 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.12■□□□□ 0.65
CtsfQ9R013 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.12■□□□□ 0.65
CtsfQ9R013 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.12■□□□□ 0.65
CtsfQ9R013 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.12■□□□□ 0.65
CtsfQ9R013 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CtsfQ9R013 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CtsfQ9R013 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CtsfQ9R013 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CtsfQ9R013 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CtsfQ9R013 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CtsfQ9R013 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CtsfQ9R013 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CtsfQ9R013 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CtsfQ9R013 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CtsfQ9R013 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CtsfQ9R013 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CtsfQ9R013 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CtsfQ9R013 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CtsfQ9R013 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CtsfQ9R013 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CtsfQ9R013 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
CtsfQ9R013 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CtsfQ9R013 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CtsfQ9R013 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CtsfQ9R013 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CtsfQ9R013 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CtsfQ9R013 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CtsfQ9R013 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CtsfQ9R013 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CtsfQ9R013 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CtsfQ9R013 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CtsfQ9R013 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.1■□□□□ 0.65
CtsfQ9R013 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.1■□□□□ 0.65
CtsfQ9R013 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.1■□□□□ 0.65
CtsfQ9R013 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.1■□□□□ 0.65
CtsfQ9R013 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CtsfQ9R013 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CtsfQ9R013 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CtsfQ9R013 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CtsfQ9R013 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CtsfQ9R013 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CtsfQ9R013 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CtsfQ9R013 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CtsfQ9R013 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CtsfQ9R013 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.09■□□□□ 0.65
CtsfQ9R013 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.09■□□□□ 0.65
CtsfQ9R013 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.09■□□□□ 0.65
CtsfQ9R013 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CtsfQ9R013 Fst-202ENSMUST00000223640 2612 ntBASIC19.09■□□□□ 0.65
CtsfQ9R013 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CtsfQ9R013 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CtsfQ9R013 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CtsfQ9R013 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
CtsfQ9R013 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.09■□□□□ 0.65
CtsfQ9R013 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CtsfQ9R013 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CtsfQ9R013 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CtsfQ9R013 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CtsfQ9R013 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CtsfQ9R013 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
CtsfQ9R013 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CtsfQ9R013 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CtsfQ9R013 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 124.4 ms