Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Grk6-206ENSMUST00000224995 2971 ntBASIC18.51■□□□□ 0.55
Znf235Q61116 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Znf235Q61116 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Znf235Q61116 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Znf235Q61116 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Znf235Q61116 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Znf235Q61116 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Znf235Q61116 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Znf235Q61116 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Znf235Q61116 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.51■□□□□ 0.55
Znf235Q61116 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.51■□□□□ 0.55
Znf235Q61116 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.51■□□□□ 0.55
Znf235Q61116 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Znf235Q61116 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Znf235Q61116 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Znf235Q61116 Il3ra-202ENSMUST00000223589 738 ntBASIC18.5■□□□□ 0.55
Znf235Q61116 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Znf235Q61116 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Znf235Q61116 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Znf235Q61116 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Znf235Q61116 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Znf235Q61116 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Znf235Q61116 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Znf235Q61116 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.49■□□□□ 0.55
Znf235Q61116 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Znf235Q61116 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Znf235Q61116 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Znf235Q61116 Gm2274-201ENSMUST00000184539 609 ntBASIC18.49■□□□□ 0.55
Znf235Q61116 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Znf235Q61116 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Znf235Q61116 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Znf235Q61116 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Znf235Q61116 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Znf235Q61116 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.49■□□□□ 0.55
Znf235Q61116 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Znf235Q61116 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Znf235Q61116 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Znf235Q61116 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Znf235Q61116 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Znf235Q61116 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Znf235Q61116 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Znf235Q61116 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Znf235Q61116 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Znf235Q61116 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Znf235Q61116 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.48■□□□□ 0.55
Znf235Q61116 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Znf235Q61116 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Znf235Q61116 Gm6659-201ENSMUST00000174752 547 ntBASIC18.48■□□□□ 0.55
Znf235Q61116 Gm9731-201ENSMUST00000209480 747 ntBASIC18.48■□□□□ 0.55
Znf235Q61116 Gm7370-201ENSMUST00000219471 767 ntBASIC18.48■□□□□ 0.55
Znf235Q61116 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Znf235Q61116 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Znf235Q61116 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Znf235Q61116 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.48■□□□□ 0.55
Znf235Q61116 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.48■□□□□ 0.55
Znf235Q61116 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Znf235Q61116 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Znf235Q61116 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Znf235Q61116 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
Znf235Q61116 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Znf235Q61116 Gm37025-201ENSMUST00000195159 829 ntBASIC18.47■□□□□ 0.55
Znf235Q61116 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.47■□□□□ 0.55
Znf235Q61116 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Znf235Q61116 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.47■□□□□ 0.55
Znf235Q61116 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Znf235Q61116 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Znf235Q61116 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Znf235Q61116 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Znf235Q61116 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Znf235Q61116 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Znf235Q61116 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Znf235Q61116 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Znf235Q61116 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Znf235Q61116 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Znf235Q61116 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Znf235Q61116 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Znf235Q61116 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Znf235Q61116 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Znf235Q61116 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Znf235Q61116 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Znf235Q61116 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Znf235Q61116 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Znf235Q61116 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Znf235Q61116 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Znf235Q61116 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Znf235Q61116 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.46■□□□□ 0.55
Znf235Q61116 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Znf235Q61116 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Znf235Q61116 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.46■□□□□ 0.55
Znf235Q61116 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Znf235Q61116 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Znf235Q61116 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.46■□□□□ 0.55
Znf235Q61116 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Znf235Q61116 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Znf235Q61116 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Znf235Q61116 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Znf235Q61116 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Znf235Q61116 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.45■□□□□ 0.54
Znf235Q61116 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Znf235Q61116 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms