Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Thumpd3P97770 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Thumpd3P97770 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Thumpd3P97770 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Thumpd3P97770 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd3P97770 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd3P97770 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Thumpd3P97770 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Thumpd3P97770 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd3P97770 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd3P97770 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd3P97770 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd3P97770 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd3P97770 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd3P97770 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd3P97770 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd3P97770 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd3P97770 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd3P97770 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd3P97770 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Thumpd3P97770 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd3P97770 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Thumpd3P97770 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd3P97770 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd3P97770 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.95■□□□□ 0.46
Thumpd3P97770 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd3P97770 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd3P97770 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.94■□□□□ 0.46
Thumpd3P97770 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Thumpd3P97770 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Thumpd3P97770 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Thumpd3P97770 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Thumpd3P97770 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Thumpd3P97770 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Thumpd3P97770 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.94■□□□□ 0.46
Thumpd3P97770 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.94■□□□□ 0.46
Thumpd3P97770 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Thumpd3P97770 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.94■□□□□ 0.46
Thumpd3P97770 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Thumpd3P97770 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Thumpd3P97770 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Thumpd3P97770 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Thumpd3P97770 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Thumpd3P97770 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Thumpd3P97770 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Thumpd3P97770 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Thumpd3P97770 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Thumpd3P97770 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Thumpd3P97770 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Thumpd3P97770 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Thumpd3P97770 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Thumpd3P97770 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Thumpd3P97770 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Thumpd3P97770 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.93■□□□□ 0.46
Thumpd3P97770 Gm10653-202ENSMUST00000139570 835 ntBASIC17.93■□□□□ 0.46
Thumpd3P97770 Gm6211-202ENSMUST00000167849 925 ntBASIC17.93■□□□□ 0.46
Thumpd3P97770 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Thumpd3P97770 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Thumpd3P97770 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Thumpd3P97770 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Thumpd3P97770 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Thumpd3P97770 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Thumpd3P97770 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Thumpd3P97770 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Thumpd3P97770 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Thumpd3P97770 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Thumpd3P97770 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.92■□□□□ 0.46
Thumpd3P97770 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Thumpd3P97770 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Thumpd3P97770 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Thumpd3P97770 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Thumpd3P97770 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Thumpd3P97770 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Thumpd3P97770 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Thumpd3P97770 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Thumpd3P97770 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Thumpd3P97770 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Thumpd3P97770 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Thumpd3P97770 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Thumpd3P97770 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thumpd3P97770 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Thumpd3P97770 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Thumpd3P97770 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Thumpd3P97770 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.91■□□□□ 0.46
Thumpd3P97770 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thumpd3P97770 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Thumpd3P97770 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thumpd3P97770 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thumpd3P97770 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.91■□□□□ 0.46
Thumpd3P97770 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Thumpd3P97770 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Thumpd3P97770 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Thumpd3P97770 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.91■□□□□ 0.46
Thumpd3P97770 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thumpd3P97770 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thumpd3P97770 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thumpd3P97770 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Thumpd3P97770 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thumpd3P97770 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thumpd3P97770 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms