Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Rtl1Q7M732 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.66
Rtl1Q7M732 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Rtl1Q7M732 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Rtl1Q7M732 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Rtl1Q7M732 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Rtl1Q7M732 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Rtl1Q7M732 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC31.64■■■□□ 2.66
Rtl1Q7M732 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Rtl1Q7M732 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
Rtl1Q7M732 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Rtl1Q7M732 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Rtl1Q7M732 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Rtl1Q7M732 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
Rtl1Q7M732 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC31.64■■■□□ 2.65
Rtl1Q7M732 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC31.63■■■□□ 2.65
Rtl1Q7M732 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Rtl1Q7M732 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Rtl1Q7M732 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Rtl1Q7M732 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Rtl1Q7M732 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Rtl1Q7M732 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC31.63■■■□□ 2.65
Rtl1Q7M732 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
Rtl1Q7M732 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Rtl1Q7M732 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC31.62■■■□□ 2.65
Rtl1Q7M732 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
Rtl1Q7M732 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Rtl1Q7M732 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
Rtl1Q7M732 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC31.62■■■□□ 2.65
Rtl1Q7M732 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Rtl1Q7M732 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC31.62■■■□□ 2.65
Rtl1Q7M732 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Rtl1Q7M732 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Rtl1Q7M732 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Rtl1Q7M732 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC31.62■■■□□ 2.65
Rtl1Q7M732 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Rtl1Q7M732 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Rtl1Q7M732 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Rtl1Q7M732 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Rtl1Q7M732 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Rtl1Q7M732 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Rtl1Q7M732 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Rtl1Q7M732 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Rtl1Q7M732 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC31.61■■■□□ 2.65
Rtl1Q7M732 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
Rtl1Q7M732 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Rtl1Q7M732 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Rtl1Q7M732 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Rtl1Q7M732 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Rtl1Q7M732 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Rtl1Q7M732 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Rtl1Q7M732 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Rtl1Q7M732 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Rtl1Q7M732 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Rtl1Q7M732 Gm4217-201ENSMUST00000182243 1002 ntBASIC31.59■■■□□ 2.65
Rtl1Q7M732 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Rtl1Q7M732 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
Rtl1Q7M732 Dmtn-207ENSMUST00000228001 2437 ntBASIC31.59■■■□□ 2.65
Rtl1Q7M732 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Rtl1Q7M732 Gm24841-201ENSMUST00000158676 357 ntBASIC31.58■■■□□ 2.65
Rtl1Q7M732 AC134329.2-201ENSMUST00000217897 428 ntBASIC31.58■■■□□ 2.65
Rtl1Q7M732 Gm7370-201ENSMUST00000219471 767 ntBASIC31.58■■■□□ 2.65
Rtl1Q7M732 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Rtl1Q7M732 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Rtl1Q7M732 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Rtl1Q7M732 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Rtl1Q7M732 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Rtl1Q7M732 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Rtl1Q7M732 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Rtl1Q7M732 Gm43353-201ENSMUST00000199224 1295 ntBASIC31.56■■■□□ 2.64
Rtl1Q7M732 AC130671.1-201ENSMUST00000227384 1237 ntBASIC31.56■■■□□ 2.64
Rtl1Q7M732 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Rtl1Q7M732 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Rtl1Q7M732 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Rtl1Q7M732 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Rtl1Q7M732 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Rtl1Q7M732 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC31.55■■■□□ 2.64
Rtl1Q7M732 Gm18958-201ENSMUST00000174258 762 ntBASIC31.55■■■□□ 2.64
Rtl1Q7M732 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Rtl1Q7M732 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Rtl1Q7M732 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
Rtl1Q7M732 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Rtl1Q7M732 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Rtl1Q7M732 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Rtl1Q7M732 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Rtl1Q7M732 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
Rtl1Q7M732 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Rtl1Q7M732 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC31.54■■■□□ 2.64
Rtl1Q7M732 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Rtl1Q7M732 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Rtl1Q7M732 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Rtl1Q7M732 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Rtl1Q7M732 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Rtl1Q7M732 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Rtl1Q7M732 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC31.52■■■□□ 2.64
Rtl1Q7M732 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
Rtl1Q7M732 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC31.52■■■□□ 2.64
Rtl1Q7M732 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Rtl1Q7M732 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Rtl1Q7M732 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms