Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Uspl1Q3ULM6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Uspl1Q3ULM6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Uspl1Q3ULM6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Uspl1Q3ULM6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Uspl1Q3ULM6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Uspl1Q3ULM6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC22.89■■□□□ 1.26
Uspl1Q3ULM6 Gm37194-201ENSMUST00000193092 3031 ntBASIC22.89■■□□□ 1.26
Uspl1Q3ULM6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC22.89■■□□□ 1.25
Uspl1Q3ULM6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Uspl1Q3ULM6 Gm13181-201ENSMUST00000120117 1069 ntBASIC22.89■■□□□ 1.25
Uspl1Q3ULM6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC22.89■■□□□ 1.25
Uspl1Q3ULM6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Uspl1Q3ULM6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC22.89■■□□□ 1.25
Uspl1Q3ULM6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC22.89■■□□□ 1.25
Uspl1Q3ULM6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Uspl1Q3ULM6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Uspl1Q3ULM6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Uspl1Q3ULM6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
Uspl1Q3ULM6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Uspl1Q3ULM6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Uspl1Q3ULM6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Uspl1Q3ULM6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Uspl1Q3ULM6 Gm7712-202ENSMUST00000222331 1510 ntBASIC22.88■■□□□ 1.25
Uspl1Q3ULM6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Uspl1Q3ULM6 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Uspl1Q3ULM6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Uspl1Q3ULM6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC22.88■■□□□ 1.25
Uspl1Q3ULM6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC22.88■■□□□ 1.25
Uspl1Q3ULM6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Uspl1Q3ULM6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Uspl1Q3ULM6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Uspl1Q3ULM6 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Uspl1Q3ULM6 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Uspl1Q3ULM6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Uspl1Q3ULM6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Uspl1Q3ULM6 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Uspl1Q3ULM6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Uspl1Q3ULM6 Gm715-201ENSMUST00000117865 831 ntBASIC22.87■■□□□ 1.25
Uspl1Q3ULM6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
Uspl1Q3ULM6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Uspl1Q3ULM6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC22.87■■□□□ 1.25
Uspl1Q3ULM6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Uspl1Q3ULM6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Uspl1Q3ULM6 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Uspl1Q3ULM6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Uspl1Q3ULM6 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Uspl1Q3ULM6 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Uspl1Q3ULM6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC22.86■■□□□ 1.25
Uspl1Q3ULM6 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Uspl1Q3ULM6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Uspl1Q3ULM6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Uspl1Q3ULM6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Uspl1Q3ULM6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC22.86■■□□□ 1.25
Uspl1Q3ULM6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC22.86■■□□□ 1.25
Uspl1Q3ULM6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Uspl1Q3ULM6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Uspl1Q3ULM6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
Uspl1Q3ULM6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
Uspl1Q3ULM6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Uspl1Q3ULM6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC22.85■■□□□ 1.25
Uspl1Q3ULM6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Uspl1Q3ULM6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Uspl1Q3ULM6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Uspl1Q3ULM6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Uspl1Q3ULM6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC22.85■■□□□ 1.25
Uspl1Q3ULM6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Uspl1Q3ULM6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC22.85■■□□□ 1.25
Uspl1Q3ULM6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Uspl1Q3ULM6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Uspl1Q3ULM6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Uspl1Q3ULM6 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Uspl1Q3ULM6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Uspl1Q3ULM6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC22.85■■□□□ 1.25
Uspl1Q3ULM6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Uspl1Q3ULM6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Uspl1Q3ULM6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Uspl1Q3ULM6 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Uspl1Q3ULM6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Uspl1Q3ULM6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Uspl1Q3ULM6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Uspl1Q3ULM6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC22.84■■□□□ 1.25
Uspl1Q3ULM6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Uspl1Q3ULM6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC22.84■■□□□ 1.25
Uspl1Q3ULM6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Uspl1Q3ULM6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC22.84■■□□□ 1.25
Uspl1Q3ULM6 Gm16042-201ENSMUST00000204813 1247 ntBASIC22.84■■□□□ 1.25
Uspl1Q3ULM6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Uspl1Q3ULM6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Uspl1Q3ULM6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Uspl1Q3ULM6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Uspl1Q3ULM6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Uspl1Q3ULM6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Uspl1Q3ULM6 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Uspl1Q3ULM6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Uspl1Q3ULM6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC22.83■■□□□ 1.25
Uspl1Q3ULM6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC22.83■■□□□ 1.25
Uspl1Q3ULM6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Uspl1Q3ULM6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Uspl1Q3ULM6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms