Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Brf2Q3UAW9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Brf2Q3UAW9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Brf2Q3UAW9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Brf2Q3UAW9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Brf2Q3UAW9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Brf2Q3UAW9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Brf2Q3UAW9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Brf2Q3UAW9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Brf2Q3UAW9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Brf2Q3UAW9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Brf2Q3UAW9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Brf2Q3UAW9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Brf2Q3UAW9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Brf2Q3UAW9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Brf2Q3UAW9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Brf2Q3UAW9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Brf2Q3UAW9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Brf2Q3UAW9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Brf2Q3UAW9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.68■□□□□ 0.26
Brf2Q3UAW9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.68■□□□□ 0.26
Brf2Q3UAW9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.68■□□□□ 0.26
Brf2Q3UAW9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Brf2Q3UAW9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Brf2Q3UAW9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Brf2Q3UAW9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Brf2Q3UAW9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Brf2Q3UAW9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Brf2Q3UAW9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.68■□□□□ 0.26
Brf2Q3UAW9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Brf2Q3UAW9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Brf2Q3UAW9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Brf2Q3UAW9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Brf2Q3UAW9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Brf2Q3UAW9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Brf2Q3UAW9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Brf2Q3UAW9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Brf2Q3UAW9 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.67■□□□□ 0.26
Brf2Q3UAW9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Brf2Q3UAW9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Brf2Q3UAW9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.67■□□□□ 0.26
Brf2Q3UAW9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Brf2Q3UAW9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Brf2Q3UAW9 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.67■□□□□ 0.26
Brf2Q3UAW9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Brf2Q3UAW9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.67■□□□□ 0.26
Brf2Q3UAW9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Brf2Q3UAW9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Brf2Q3UAW9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Brf2Q3UAW9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Brf2Q3UAW9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Brf2Q3UAW9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Brf2Q3UAW9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Brf2Q3UAW9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Brf2Q3UAW9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Brf2Q3UAW9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Brf2Q3UAW9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Brf2Q3UAW9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Brf2Q3UAW9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Brf2Q3UAW9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Brf2Q3UAW9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Brf2Q3UAW9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Brf2Q3UAW9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Brf2Q3UAW9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Brf2Q3UAW9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Brf2Q3UAW9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Brf2Q3UAW9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Brf2Q3UAW9 Idnk-204ENSMUST00000226010 1898 ntBASIC16.65■□□□□ 0.26
Brf2Q3UAW9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Brf2Q3UAW9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Brf2Q3UAW9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Brf2Q3UAW9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.65■□□□□ 0.26
Brf2Q3UAW9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Brf2Q3UAW9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Brf2Q3UAW9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Brf2Q3UAW9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Brf2Q3UAW9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.65■□□□□ 0.26
Brf2Q3UAW9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.65■□□□□ 0.26
Brf2Q3UAW9 Gm2559-201ENSMUST00000201323 363 ntBASIC16.65■□□□□ 0.26
Brf2Q3UAW9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.65■□□□□ 0.26
Brf2Q3UAW9 Gm4968-201ENSMUST00000071458 858 ntBASIC16.65■□□□□ 0.26
Brf2Q3UAW9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.65■□□□□ 0.26
Brf2Q3UAW9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Brf2Q3UAW9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Brf2Q3UAW9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Brf2Q3UAW9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Brf2Q3UAW9 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.65■□□□□ 0.26
Brf2Q3UAW9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Brf2Q3UAW9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Brf2Q3UAW9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Brf2Q3UAW9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Brf2Q3UAW9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Brf2Q3UAW9 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.64■□□□□ 0.25
Brf2Q3UAW9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Brf2Q3UAW9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Brf2Q3UAW9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Brf2Q3UAW9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Brf2Q3UAW9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brf2Q3UAW9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brf2Q3UAW9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms