Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43aQ3TL54 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43aQ3TL54 AV356131-201ENSMUST00000206201 750 ntBASIC18.8■□□□□ 0.6
Trim43aQ3TL54 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43aQ3TL54 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim43aQ3TL54 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43aQ3TL54 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim43aQ3TL54 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43aQ3TL54 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.8■□□□□ 0.6
Trim43aQ3TL54 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43aQ3TL54 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim43aQ3TL54 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trim43aQ3TL54 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim43aQ3TL54 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim43aQ3TL54 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim43aQ3TL54 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim43aQ3TL54 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim43aQ3TL54 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim43aQ3TL54 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim43aQ3TL54 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim43aQ3TL54 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim43aQ3TL54 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43aQ3TL54 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim43aQ3TL54 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.78■□□□□ 0.6
Trim43aQ3TL54 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43aQ3TL54 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trim43aQ3TL54 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43aQ3TL54 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43aQ3TL54 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43aQ3TL54 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43aQ3TL54 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trim43aQ3TL54 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43aQ3TL54 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim43aQ3TL54 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trim43aQ3TL54 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trim43aQ3TL54 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.78■□□□□ 0.6
Trim43aQ3TL54 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43aQ3TL54 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43aQ3TL54 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim43aQ3TL54 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim43aQ3TL54 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim43aQ3TL54 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trim43aQ3TL54 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim43aQ3TL54 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trim43aQ3TL54 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim43aQ3TL54 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim43aQ3TL54 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim43aQ3TL54 Gm13234-201ENSMUST00000120010 747 ntBASIC18.77■□□□□ 0.6
Trim43aQ3TL54 Gm26571-201ENSMUST00000181399 666 ntBASIC18.77■□□□□ 0.6
Trim43aQ3TL54 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.77■□□□□ 0.6
Trim43aQ3TL54 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim43aQ3TL54 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trim43aQ3TL54 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim43aQ3TL54 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43aQ3TL54 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43aQ3TL54 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43aQ3TL54 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43aQ3TL54 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43aQ3TL54 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43aQ3TL54 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43aQ3TL54 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43aQ3TL54 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43aQ3TL54 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.76■□□□□ 0.59
Trim43aQ3TL54 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.76■□□□□ 0.59
Trim43aQ3TL54 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.76■□□□□ 0.59
Trim43aQ3TL54 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Trim43aQ3TL54 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43aQ3TL54 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43aQ3TL54 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43aQ3TL54 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43aQ3TL54 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43aQ3TL54 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43aQ3TL54 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43aQ3TL54 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43aQ3TL54 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43aQ3TL54 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.75■□□□□ 0.59
Trim43aQ3TL54 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43aQ3TL54 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43aQ3TL54 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43aQ3TL54 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43aQ3TL54 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.75■□□□□ 0.59
Trim43aQ3TL54 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43aQ3TL54 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43aQ3TL54 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Trim43aQ3TL54 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43aQ3TL54 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43aQ3TL54 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim43aQ3TL54 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43aQ3TL54 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43aQ3TL54 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43aQ3TL54 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43aQ3TL54 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Trim43aQ3TL54 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43aQ3TL54 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43aQ3TL54 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43aQ3TL54 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trim43aQ3TL54 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43aQ3TL54 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43aQ3TL54 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43aQ3TL54 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 242.6 ms